Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 RPSAP43-201ENST00000402237 625 ntBASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 UPF3AP3-201ENST00000420996 769 ntBASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 GPX1P2-201ENST00000429271 606 ntBASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 HCG4B-203ENST00000450128 991 ntBASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 AC112482.1-201ENST00000492080 688 ntBASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 OR7E47P-204ENST00000575924 449 ntBASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 LINC01451-201ENST00000623792 534 ntBASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 AC008764.6-201ENST00000595909 2069 ntBASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 AL590787.1-201ENST00000568856 1315 ntBASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 PI4KAP1-204ENST00000612579 1703 ntBASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PRAMEF17Q5VTA0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 IGLL3P-201ENST00000412472 434 ntBASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PRAMEF17Q5VTA0 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 AL513190.1-201ENST00000621254 727 ntBASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PRAMEF17Q5VTA0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms