Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
IRX3P78415 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IRX3P78415 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.01■□□□□ 0.79
IRX3P78415 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.01■□□□□ 0.79
IRX3P78415 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IRX3P78415 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IRX3P78415 AL139400.1-201ENST00000366220 510 ntBASIC20.01■□□□□ 0.79
IRX3P78415 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.01■□□□□ 0.79
IRX3P78415 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.01■□□□□ 0.79
IRX3P78415 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.01■□□□□ 0.79
IRX3P78415 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.01■□□□□ 0.79
IRX3P78415 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.01■□□□□ 0.79
IRX3P78415 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.01■□□□□ 0.79
IRX3P78415 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.01■□□□□ 0.79
IRX3P78415 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
IRX3P78415 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IRX3P78415 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IRX3P78415 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IRX3P78415 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
IRX3P78415 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
IRX3P78415 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IRX3P78415 HTR7P1-202ENST00000624664 4411 ntBASIC20.01■□□□□ 0.79
IRX3P78415 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IRX3P78415 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IRX3P78415 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
IRX3P78415 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
IRX3P78415 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20■□□□□ 0.79
IRX3P78415 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20■□□□□ 0.79
IRX3P78415 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20■□□□□ 0.79
IRX3P78415 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IRX3P78415 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IRX3P78415 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20■□□□□ 0.79
IRX3P78415 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IRX3P78415 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
IRX3P78415 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IRX3P78415 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20■□□□□ 0.79
IRX3P78415 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
IRX3P78415 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
IRX3P78415 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IRX3P78415 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IRX3P78415 AC004461.1-201ENST00000412461 403 ntBASIC20■□□□□ 0.79
IRX3P78415 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
IRX3P78415 AL513480.1-201ENST00000451731 511 ntBASIC20■□□□□ 0.79
IRX3P78415 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20■□□□□ 0.79
IRX3P78415 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20■□□□□ 0.79
IRX3P78415 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
IRX3P78415 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
IRX3P78415 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IRX3P78415 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20■□□□□ 0.79
IRX3P78415 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20■□□□□ 0.79
IRX3P78415 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20■□□□□ 0.79
IRX3P78415 REXO1L3P-201ENST00000622202 1288 ntBASIC20■□□□□ 0.79
IRX3P78415 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IRX3P78415 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20■□□□□ 0.79
IRX3P78415 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IRX3P78415 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
IRX3P78415 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IRX3P78415 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20■□□□□ 0.79
IRX3P78415 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IRX3P78415 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20■□□□□ 0.79
IRX3P78415 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IRX3P78415 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
IRX3P78415 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IRX3P78415 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
IRX3P78415 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
IRX3P78415 AC093503.3-201ENST00000624917 2352 ntBASIC19.99■□□□□ 0.79
IRX3P78415 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.99■□□□□ 0.79
IRX3P78415 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
IRX3P78415 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
IRX3P78415 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.99■□□□□ 0.79
IRX3P78415 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
IRX3P78415 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IRX3P78415 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
IRX3P78415 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IRX3P78415 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
IRX3P78415 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
IRX3P78415 FAM185BP-201ENST00000443595 716 ntBASIC19.99■□□□□ 0.79
IRX3P78415 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.99■□□□□ 0.79
IRX3P78415 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.99■□□□□ 0.79
IRX3P78415 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IRX3P78415 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.99■□□□□ 0.79
IRX3P78415 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.99■□□□□ 0.79
IRX3P78415 AC105339.1-204ENST00000636249 355 ntBASIC19.99■□□□□ 0.79
IRX3P78415 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IRX3P78415 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
IRX3P78415 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
IRX3P78415 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.99■□□□□ 0.79
IRX3P78415 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.99■□□□□ 0.79
IRX3P78415 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IRX3P78415 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
IRX3P78415 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
IRX3P78415 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
IRX3P78415 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.99■□□□□ 0.79
IRX3P78415 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC19.99■□□□□ 0.79
IRX3P78415 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.99■□□□□ 0.79
IRX3P78415 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IRX3P78415 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
IRX3P78415 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
IRX3P78415 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.98■□□□□ 0.79
IRX3P78415 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms