Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA4AP68366 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBA4AP68366 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA4AP68366 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TUBA4AP68366 KRT18P38-201ENST00000449496 1282 ntBASIC16.21■□□□□ 0.19
TUBA4AP68366 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA4AP68366 SEC1P-202ENST00000473944 940 ntBASIC16.21■□□□□ 0.19
TUBA4AP68366 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBA4AP68366 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA4AP68366 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.21■□□□□ 0.19
TUBA4AP68366 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBA4AP68366 NTF6B-201ENST00000591913 560 ntBASIC16.21■□□□□ 0.19
TUBA4AP68366 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBA4AP68366 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA4AP68366 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA4AP68366 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
TUBA4AP68366 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA4AP68366 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
TUBA4AP68366 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA4AP68366 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA4AP68366 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
TUBA4AP68366 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA4AP68366 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA4AP68366 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.21■□□□□ 0.19
TUBA4AP68366 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA4AP68366 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA4AP68366 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA4AP68366 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.21■□□□□ 0.19
TUBA4AP68366 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TUBA4AP68366 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TUBA4AP68366 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
TUBA4AP68366 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TUBA4AP68366 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
TUBA4AP68366 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TUBA4AP68366 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.2■□□□□ 0.18
TUBA4AP68366 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.2■□□□□ 0.18
TUBA4AP68366 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.2■□□□□ 0.18
TUBA4AP68366 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
TUBA4AP68366 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TUBA4AP68366 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 SPDYE15P-201ENST00000424157 909 ntBASIC16.2■□□□□ 0.18
TUBA4AP68366 AC063952.2-201ENST00000498792 1227 ntBASIC16.2■□□□□ 0.18
TUBA4AP68366 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TUBA4AP68366 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.2■□□□□ 0.18
TUBA4AP68366 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.2■□□□□ 0.18
TUBA4AP68366 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.2■□□□□ 0.18
TUBA4AP68366 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TUBA4AP68366 AL031432.5-201ENST00000641059 760 ntBASIC16.2■□□□□ 0.18
TUBA4AP68366 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
TUBA4AP68366 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
TUBA4AP68366 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.2■□□□□ 0.18
TUBA4AP68366 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TUBA4AP68366 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.2■□□□□ 0.18
TUBA4AP68366 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TUBA4AP68366 RNF216P1-203ENST00000404404 2427 ntBASIC16.19■□□□□ 0.18
TUBA4AP68366 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
TUBA4AP68366 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TUBA4AP68366 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
TUBA4AP68366 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA4AP68366 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA4AP68366 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA4AP68366 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA4AP68366 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA4AP68366 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.19■□□□□ 0.18
TUBA4AP68366 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA4AP68366 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA4AP68366 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TUBA4AP68366 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA4AP68366 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA4AP68366 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA4AP68366 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA4AP68366 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA4AP68366 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TUBA4AP68366 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.19■□□□□ 0.18
TUBA4AP68366 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TUBA4AP68366 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBA4AP68366 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBA4AP68366 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.19■□□□□ 0.18
TUBA4AP68366 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.19■□□□□ 0.18
TUBA4AP68366 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.19■□□□□ 0.18
TUBA4AP68366 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms