Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS3AP61247 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RPS3AP61247 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS3AP61247 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RPS3AP61247 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS3AP61247 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.21■□□□□ 0.19
RPS3AP61247 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RPS3AP61247 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS3AP61247 TOB2P1-201ENST00000469761 992 ntBASIC16.21■□□□□ 0.19
RPS3AP61247 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RPS3AP61247 AP000867.3-201ENST00000524675 377 ntBASIC16.21■□□□□ 0.19
RPS3AP61247 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RPS3AP61247 TPSP2-201ENST00000561760 610 ntBASIC16.21■□□□□ 0.19
RPS3AP61247 MIR3180-1-201ENST00000580374 94 ntBASIC16.21■□□□□ 0.19
RPS3AP61247 MIR3180-3-201ENST00000584616 94 ntBASIC16.21■□□□□ 0.19
RPS3AP61247 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS3AP61247 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS3AP61247 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.21■□□□□ 0.19
RPS3AP61247 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS3AP61247 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.21■□□□□ 0.19
RPS3AP61247 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS3AP61247 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPS3AP61247 PCDHA14-201ENST00000506751 2298 ntBASIC16.21■□□□□ 0.19
RPS3AP61247 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RPS3AP61247 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.21■□□□□ 0.19
RPS3AP61247 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RPS3AP61247 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
RPS3AP61247 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.21■□□□□ 0.18
RPS3AP61247 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RPS3AP61247 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RPS3AP61247 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RPS3AP61247 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
RPS3AP61247 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RPS3AP61247 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RPS3AP61247 KRT18P55-202ENST00000578578 1546 ntBASIC16.2■□□□□ 0.18
RPS3AP61247 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS3AP61247 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS3AP61247 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RPS3AP61247 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RPS3AP61247 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.2■□□□□ 0.18
RPS3AP61247 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.2■□□□□ 0.18
RPS3AP61247 AC246785.2-201ENST00000432512 513 ntBASIC16.2■□□□□ 0.18
RPS3AP61247 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.2■□□□□ 0.18
RPS3AP61247 RN7SL606P-201ENST00000472779 293 ntBASIC16.2■□□□□ 0.18
RPS3AP61247 AC104819.1-201ENST00000504587 486 ntBASIC16.2■□□□□ 0.18
RPS3AP61247 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.2■□□□□ 0.18
RPS3AP61247 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.2■□□□□ 0.18
RPS3AP61247 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.2■□□□□ 0.18
RPS3AP61247 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RPS3AP61247 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.2■□□□□ 0.18
RPS3AP61247 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RPS3AP61247 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS3AP61247 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.2■□□□□ 0.18
RPS3AP61247 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.2■□□□□ 0.18
RPS3AP61247 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS3AP61247 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.2■□□□□ 0.18
RPS3AP61247 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
RPS3AP61247 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RPS3AP61247 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS3AP61247 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS3AP61247 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS3AP61247 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS3AP61247 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPS3AP61247 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPS3AP61247 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS3AP61247 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS3AP61247 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.19■□□□□ 0.18
RPS3AP61247 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.19■□□□□ 0.18
RPS3AP61247 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPS3AP61247 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS3AP61247 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS3AP61247 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.19■□□□□ 0.18
RPS3AP61247 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS3AP61247 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS3AP61247 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.19■□□□□ 0.18
RPS3AP61247 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.19■□□□□ 0.18
RPS3AP61247 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS3AP61247 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.19■□□□□ 0.18
RPS3AP61247 AC012615.1-201ENST00000565797 1299 ntBASIC16.19■□□□□ 0.18
RPS3AP61247 PRELID1P1-202ENST00000567272 903 ntBASIC16.19■□□□□ 0.18
RPS3AP61247 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RPS3AP61247 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.19■□□□□ 0.18
RPS3AP61247 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.19■□□□□ 0.18
RPS3AP61247 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.19■□□□□ 0.18
RPS3AP61247 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS3AP61247 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPS3AP61247 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPS3AP61247 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS3AP61247 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.19■□□□□ 0.18
RPS3AP61247 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.19■□□□□ 0.18
RPS3AP61247 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS3AP61247 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS3AP61247 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.19■□□□□ 0.18
RPS3AP61247 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS3AP61247 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPS3AP61247 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.19■□□□□ 0.18
RPS3AP61247 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RPS3AP61247 AC022898.2-201ENST00000616822 1312 ntBASIC16.19■□□□□ 0.18
RPS3AP61247 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RPS3AP61247 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms