Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S2P56377 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
AP1S2P56377 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.77■□□□□ 0.28
AP1S2P56377 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S2P56377 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
AP1S2P56377 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S2P56377 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S2P56377 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S2P56377 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S2P56377 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S2P56377 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S2P56377 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S2P56377 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.77■□□□□ 0.28
AP1S2P56377 SAPCD2P3-201ENST00000455031 850 ntBASIC16.77■□□□□ 0.28
AP1S2P56377 SCARNA2-201ENST00000458748 420 ntBASIC16.77■□□□□ 0.28
AP1S2P56377 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.77■□□□□ 0.28
AP1S2P56377 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
AP1S2P56377 KRT18P56-201ENST00000507275 550 ntBASIC16.77■□□□□ 0.28
AP1S2P56377 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.77■□□□□ 0.28
AP1S2P56377 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S2P56377 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
AP1S2P56377 NKAPP1-205ENST00000585790 367 ntBASIC16.77■□□□□ 0.28
AP1S2P56377 AC008608.2-201ENST00000606089 416 ntBASIC16.77■□□□□ 0.28
AP1S2P56377 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S2P56377 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
AP1S2P56377 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S2P56377 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
AP1S2P56377 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP1S2P56377 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
AP1S2P56377 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP1S2P56377 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
AP1S2P56377 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP1S2P56377 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
AP1S2P56377 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
AP1S2P56377 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
AP1S2P56377 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.76■□□□□ 0.27
AP1S2P56377 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.76■□□□□ 0.27
AP1S2P56377 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S2P56377 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S2P56377 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S2P56377 AD000864.1-201ENST00000624076 2295 ntBASIC16.76■□□□□ 0.27
AP1S2P56377 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S2P56377 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S2P56377 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.76■□□□□ 0.27
AP1S2P56377 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S2P56377 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S2P56377 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
AP1S2P56377 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
AP1S2P56377 FGFR3P6-201ENST00000457012 610 ntBASIC16.76■□□□□ 0.27
AP1S2P56377 BX005266.1-201ENST00000473402 457 ntBASIC16.76■□□□□ 0.27
AP1S2P56377 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.76■□□□□ 0.27
AP1S2P56377 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.76■□□□□ 0.27
AP1S2P56377 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.76■□□□□ 0.27
AP1S2P56377 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.76■□□□□ 0.27
AP1S2P56377 AL589182.2-201ENST00000619332 1049 ntBASIC16.76■□□□□ 0.27
AP1S2P56377 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
AP1S2P56377 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S2P56377 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
AP1S2P56377 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S2P56377 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S2P56377 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S2P56377 AC092053.1-201ENST00000605787 1936 ntBASIC16.76■□□□□ 0.27
AP1S2P56377 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
AP1S2P56377 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S2P56377 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.76■□□□□ 0.27
AP1S2P56377 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S2P56377 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
AP1S2P56377 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.75■□□□□ 0.27
AP1S2P56377 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S2P56377 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S2P56377 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.75■□□□□ 0.27
AP1S2P56377 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S2P56377 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.75■□□□□ 0.27
AP1S2P56377 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S2P56377 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
AP1S2P56377 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S2P56377 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.75■□□□□ 0.27
AP1S2P56377 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S2P56377 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S2P56377 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S2P56377 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
AP1S2P56377 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.75■□□□□ 0.27
AP1S2P56377 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S2P56377 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
AP1S2P56377 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.75■□□□□ 0.27
AP1S2P56377 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.75■□□□□ 0.27
AP1S2P56377 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
AP1S2P56377 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S2P56377 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.75■□□□□ 0.27
AP1S2P56377 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.75■□□□□ 0.27
AP1S2P56377 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.75■□□□□ 0.27
AP1S2P56377 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S2P56377 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S2P56377 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S2P56377 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
AP1S2P56377 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S2P56377 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S2P56377 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S2P56377 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AP1S2P56377 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms