Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A1P53007 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A1P53007 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A1P53007 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A1P53007 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SLC25A1P53007 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A1P53007 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A1P53007 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
SLC25A1P53007 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A1P53007 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A1P53007 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A1P53007 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A1P53007 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A1P53007 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC25A1P53007 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A1P53007 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A1P53007 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A1P53007 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A1P53007 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC25A1P53007 DRAXINP1-201ENST00000437611 948 ntBASIC15.3■□□□□ 0.04
SLC25A1P53007 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC25A1P53007 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC25A1P53007 PMPCAP1-201ENST00000508114 1576 ntBASIC15.3■□□□□ 0.04
SLC25A1P53007 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.3■□□□□ 0.04
SLC25A1P53007 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.3■□□□□ 0.04
SLC25A1P53007 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A1P53007 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.3■□□□□ 0.04
SLC25A1P53007 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A1P53007 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SLC25A1P53007 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A1P53007 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC25A1P53007 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A1P53007 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SLC25A1P53007 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC25A1P53007 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC25A1P53007 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SLC25A1P53007 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC25A1P53007 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC25A1P53007 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC25A1P53007 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC25A1P53007 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SLC25A1P53007 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC25A1P53007 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
SLC25A1P53007 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC25A1P53007 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC25A1P53007 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
SLC25A1P53007 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC25A1P53007 KRT18P1-202ENST00000452408 1331 ntBASIC15.29■□□□□ 0.04
SLC25A1P53007 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SLC25A1P53007 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC25A1P53007 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.29■□□□□ 0.04
SLC25A1P53007 ACTG1P4-201ENST00000425123 1122 ntBASIC15.29■□□□□ 0.04
SLC25A1P53007 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC25A1P53007 SIGLEC30P-201ENST00000455569 941 ntBASIC15.29■□□□□ 0.04
SLC25A1P53007 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.29■□□□□ 0.04
SLC25A1P53007 FAM86EP-206ENST00000510506 987 ntBASIC15.29■□□□□ 0.04
SLC25A1P53007 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC25A1P53007 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC25A1P53007 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.29■□□□□ 0.04
SLC25A1P53007 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC25A1P53007 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.29■□□□□ 0.04
SLC25A1P53007 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SLC25A1P53007 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SLC25A1P53007 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC25A1P53007 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SLC25A1P53007 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SLC25A1P53007 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC25A1P53007 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC25A1P53007 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
SLC25A1P53007 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC25A1P53007 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
SLC25A1P53007 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC25A1P53007 TSSC2-201ENST00000450217 709 ntBASIC15.28■□□□□ 0.04
SLC25A1P53007 MINOS1P3-201ENST00000457048 203 ntBASIC15.28■□□□□ 0.04
SLC25A1P53007 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.28■□□□□ 0.04
SLC25A1P53007 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SLC25A1P53007 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SLC25A1P53007 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC25A1P53007 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC25A1P53007 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.28■□□□□ 0.04
SLC25A1P53007 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SLC25A1P53007 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.28■□□□□ 0.04
SLC25A1P53007 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms