Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.14□□□□□ -0.15
NKX2-1P43699 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.14□□□□□ -0.15
NKX2-1P43699 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.14□□□□□ -0.15
NKX2-1P43699 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.14□□□□□ -0.15
NKX2-1P43699 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.14□□□□□ -0.15
NKX2-1P43699 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NKX2-1P43699 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NKX2-1P43699 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.14□□□□□ -0.15
NKX2-1P43699 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NKX2-1P43699 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NKX2-1P43699 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NKX2-1P43699 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.14□□□□□ -0.15
NKX2-1P43699 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 AC007663.1-201ENST00000438948 1240 ntBASIC14.14□□□□□ -0.15
NKX2-1P43699 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.14□□□□□ -0.15
NKX2-1P43699 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NKX2-1P43699 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.14□□□□□ -0.15
NKX2-1P43699 AL049637.2-201ENST00000641778 930 ntBASIC14.14□□□□□ -0.15
NKX2-1P43699 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NKX2-1P43699 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.14□□□□□ -0.15
NKX2-1P43699 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
NKX2-1P43699 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 AC007950.2-201ENST00000615045 2347 ntBASIC14.14□□□□□ -0.15
NKX2-1P43699 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.14□□□□□ -0.15
NKX2-1P43699 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX2-1P43699 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NKX2-1P43699 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.13□□□□□ -0.15
NKX2-1P43699 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.13□□□□□ -0.15
NKX2-1P43699 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NKX2-1P43699 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NKX2-1P43699 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NKX2-1P43699 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
NKX2-1P43699 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NKX2-1P43699 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.13□□□□□ -0.15
NKX2-1P43699 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.13□□□□□ -0.15
NKX2-1P43699 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.13□□□□□ -0.15
NKX2-1P43699 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 AC002558.1-201ENST00000488906 803 ntBASIC14.13□□□□□ -0.15
NKX2-1P43699 AC112698.1-201ENST00000510299 916 ntBASIC14.13□□□□□ -0.15
NKX2-1P43699 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.13□□□□□ -0.15
NKX2-1P43699 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.13□□□□□ -0.15
NKX2-1P43699 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.13□□□□□ -0.15
NKX2-1P43699 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.13□□□□□ -0.15
NKX2-1P43699 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.13□□□□□ -0.15
NKX2-1P43699 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 AC113410.3-201ENST00000623366 203 ntBASIC14.13□□□□□ -0.15
NKX2-1P43699 AC010653.2-201ENST00000623505 997 ntBASIC14.13□□□□□ -0.15
NKX2-1P43699 AP006294.2-201ENST00000641667 209 ntBASIC14.13□□□□□ -0.15
NKX2-1P43699 AC126755.1-201ENST00000525846 6405 ntBASIC14.13□□□□□ -0.15
NKX2-1P43699 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.13□□□□□ -0.15
NKX2-1P43699 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NKX2-1P43699 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.13□□□□□ -0.15
NKX2-1P43699 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX2-1P43699 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms