Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
ATP6V1AP38606 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
ATP6V1AP38606 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V1AP38606 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V1AP38606 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.76■■□□□ 1.07
ATP6V1AP38606 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.76■■□□□ 1.07
ATP6V1AP38606 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.76■■□□□ 1.07
ATP6V1AP38606 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V1AP38606 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ATP6V1AP38606 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V1AP38606 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP6V1AP38606 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V1AP38606 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V1AP38606 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V1AP38606 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
ATP6V1AP38606 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
ATP6V1AP38606 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.75■■□□□ 1.07
ATP6V1AP38606 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP6V1AP38606 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V1AP38606 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V1AP38606 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V1AP38606 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
ATP6V1AP38606 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V1AP38606 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
ATP6V1AP38606 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC21.75■■□□□ 1.07
ATP6V1AP38606 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC21.75■■□□□ 1.07
ATP6V1AP38606 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP6V1AP38606 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP6V1AP38606 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ATP6V1AP38606 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP6V1AP38606 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V1AP38606 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP6V1AP38606 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
ATP6V1AP38606 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V1AP38606 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC21.75■■□□□ 1.07
ATP6V1AP38606 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V1AP38606 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ATP6V1AP38606 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC21.74■■□□□ 1.07
ATP6V1AP38606 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V1AP38606 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
ATP6V1AP38606 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V1AP38606 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V1AP38606 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V1AP38606 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V1AP38606 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V1AP38606 MIR346-201ENST00000362234 95 ntBASIC21.74■■□□□ 1.07
ATP6V1AP38606 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC21.74■■□□□ 1.07
ATP6V1AP38606 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
ATP6V1AP38606 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
ATP6V1AP38606 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
ATP6V1AP38606 CRB3P1-201ENST00000449338 276 ntBASIC21.74■■□□□ 1.07
ATP6V1AP38606 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V1AP38606 MIR4453-201ENST00000584019 89 ntBASIC21.74■■□□□ 1.07
ATP6V1AP38606 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
ATP6V1AP38606 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V1AP38606 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V1AP38606 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V1AP38606 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V1AP38606 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V1AP38606 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.74■■□□□ 1.07
ATP6V1AP38606 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V1AP38606 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ATP6V1AP38606 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
ATP6V1AP38606 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP6V1AP38606 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
ATP6V1AP38606 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
ATP6V1AP38606 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP6V1AP38606 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
ATP6V1AP38606 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP6V1AP38606 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP6V1AP38606 SERBP1P5-201ENST00000510079 1181 ntBASIC21.73■■□□□ 1.07
ATP6V1AP38606 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
ATP6V1AP38606 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.73■■□□□ 1.07
ATP6V1AP38606 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
ATP6V1AP38606 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP6V1AP38606 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP6V1AP38606 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.73■■□□□ 1.07
ATP6V1AP38606 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP6V1AP38606 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP6V1AP38606 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
ATP6V1AP38606 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP6V1AP38606 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP6V1AP38606 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
ATP6V1AP38606 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP6V1AP38606 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
ATP6V1AP38606 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6V1AP38606 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
ATP6V1AP38606 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6V1AP38606 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6V1AP38606 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.72■■□□□ 1.07
ATP6V1AP38606 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ATP6V1AP38606 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ATP6V1AP38606 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.72■■□□□ 1.07
ATP6V1AP38606 RNU1-129P-201ENST00000384064 167 ntBASIC21.72■■□□□ 1.07
ATP6V1AP38606 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
ATP6V1AP38606 AC004890.2-204ENST00000481968 304 ntBASIC21.72■■□□□ 1.07
ATP6V1AP38606 MTRF1LP2-201ENST00000506027 1122 ntBASIC21.72■■□□□ 1.07
ATP6V1AP38606 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATP6V1AP38606 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC21.72■■□□□ 1.07
ATP6V1AP38606 U1.21-201ENST00000580816 167 ntBASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms