Protein–RNA interactions for Protein: P36222

CHI3L1, Chitinase-3-like protein 1, humanhuman

Predicted RBP Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHI3L1P36222 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.33■□□□□ 0.21
CHI3L1P36222 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHI3L1P36222 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CHI3L1P36222 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHI3L1P36222 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.33■□□□□ 0.21
CHI3L1P36222 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.33■□□□□ 0.21
CHI3L1P36222 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHI3L1P36222 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHI3L1P36222 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHI3L1P36222 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHI3L1P36222 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.33■□□□□ 0.2
CHI3L1P36222 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHI3L1P36222 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHI3L1P36222 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CHI3L1P36222 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.33■□□□□ 0.2
CHI3L1P36222 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.2
CHI3L1P36222 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.33■□□□□ 0.2
CHI3L1P36222 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHI3L1P36222 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHI3L1P36222 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.33■□□□□ 0.2
CHI3L1P36222 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.33■□□□□ 0.2
CHI3L1P36222 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHI3L1P36222 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.33■□□□□ 0.2
CHI3L1P36222 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHI3L1P36222 AL121672.3-201ENST00000608644 468 ntBASIC16.33■□□□□ 0.2
CHI3L1P36222 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.33■□□□□ 0.2
CHI3L1P36222 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHI3L1P36222 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CHI3L1P36222 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.33■□□□□ 0.2
CHI3L1P36222 KRT8P10-201ENST00000450021 1447 ntBASIC16.33■□□□□ 0.2
CHI3L1P36222 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHI3L1P36222 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.33■□□□□ 0.2
CHI3L1P36222 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.33■□□□□ 0.2
CHI3L1P36222 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
CHI3L1P36222 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.33■□□□□ 0.2
CHI3L1P36222 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHI3L1P36222 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.33■□□□□ 0.2
CHI3L1P36222 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.33■□□□□ 0.2
CHI3L1P36222 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHI3L1P36222 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHI3L1P36222 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHI3L1P36222 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHI3L1P36222 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
CHI3L1P36222 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.32■□□□□ 0.2
CHI3L1P36222 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHI3L1P36222 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHI3L1P36222 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.32■□□□□ 0.2
CHI3L1P36222 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.32■□□□□ 0.2
CHI3L1P36222 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHI3L1P36222 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHI3L1P36222 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.32■□□□□ 0.2
CHI3L1P36222 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHI3L1P36222 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHI3L1P36222 SLC25A1P3-201ENST00000395415 828 ntBASIC16.32■□□□□ 0.2
CHI3L1P36222 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.32■□□□□ 0.2
CHI3L1P36222 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.32■□□□□ 0.2
CHI3L1P36222 AC246785.2-201ENST00000432512 513 ntBASIC16.32■□□□□ 0.2
CHI3L1P36222 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHI3L1P36222 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHI3L1P36222 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.32■□□□□ 0.2
CHI3L1P36222 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.32■□□□□ 0.2
CHI3L1P36222 AC009533.2-201ENST00000543664 586 ntBASIC16.32■□□□□ 0.2
CHI3L1P36222 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.32■□□□□ 0.2
CHI3L1P36222 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.32■□□□□ 0.2
CHI3L1P36222 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.32■□□□□ 0.2
CHI3L1P36222 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
CHI3L1P36222 AC092053.1-201ENST00000605787 1936 ntBASIC16.32■□□□□ 0.2
CHI3L1P36222 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CHI3L1P36222 AL121956.5-201ENST00000625261 221 ntBASIC16.32■□□□□ 0.2
CHI3L1P36222 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.32■□□□□ 0.2
CHI3L1P36222 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.32■□□□□ 0.2
CHI3L1P36222 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHI3L1P36222 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHI3L1P36222 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
CHI3L1P36222 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
CHI3L1P36222 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.32■□□□□ 0.2
CHI3L1P36222 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CHI3L1P36222 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.31■□□□□ 0.2
CHI3L1P36222 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CHI3L1P36222 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHI3L1P36222 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHI3L1P36222 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHI3L1P36222 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.31■□□□□ 0.2
CHI3L1P36222 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHI3L1P36222 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHI3L1P36222 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.31■□□□□ 0.2
CHI3L1P36222 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHI3L1P36222 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.31■□□□□ 0.2
CHI3L1P36222 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CHI3L1P36222 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHI3L1P36222 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHI3L1P36222 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHI3L1P36222 CHCHD2P8-201ENST00000429873 447 ntBASIC16.31■□□□□ 0.2
CHI3L1P36222 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHI3L1P36222 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CHI3L1P36222 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
CHI3L1P36222 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHI3L1P36222 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.31■□□□□ 0.2
CHI3L1P36222 STK19B-204ENST00000512515 211 ntBASIC16.31■□□□□ 0.2
CHI3L1P36222 KRT18P21-201ENST00000515767 1272 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms