Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
RFC1P35251 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
RFC1P35251 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC1P35251 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC1P35251 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RFC1P35251 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.17■□□□□ 0.5
RFC1P35251 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC1P35251 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
RFC1P35251 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC1P35251 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFC1P35251 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC1P35251 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC1P35251 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC1P35251 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFC1P35251 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.17■□□□□ 0.5
RFC1P35251 SIGLEC30P-201ENST00000455569 941 ntBASIC18.17■□□□□ 0.5
RFC1P35251 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFC1P35251 AC106795.1-205ENST00000512851 1056 ntBASIC18.17■□□□□ 0.5
RFC1P35251 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.17■□□□□ 0.5
RFC1P35251 PRELID1P1-202ENST00000567272 903 ntBASIC18.17■□□□□ 0.5
RFC1P35251 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.17■□□□□ 0.5
RFC1P35251 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC1P35251 AC012313.10-201ENST00000623509 926 ntBASIC18.17■□□□□ 0.5
RFC1P35251 AD000864.1-201ENST00000624076 2295 ntBASIC18.17■□□□□ 0.5
RFC1P35251 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.17■□□□□ 0.5
RFC1P35251 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.17■□□□□ 0.5
RFC1P35251 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
RFC1P35251 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC1P35251 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC1P35251 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.17■□□□□ 0.5
RFC1P35251 PRORSD1P-202ENST00000563365 2154 ntBASIC18.17■□□□□ 0.5
RFC1P35251 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFC1P35251 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.17■□□□□ 0.5
RFC1P35251 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.17■□□□□ 0.5
RFC1P35251 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.17■□□□□ 0.5
RFC1P35251 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFC1P35251 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC1P35251 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.16■□□□□ 0.5
RFC1P35251 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFC1P35251 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RFC1P35251 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RFC1P35251 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.16■□□□□ 0.5
RFC1P35251 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RFC1P35251 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC1P35251 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.16■□□□□ 0.5
RFC1P35251 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.16■□□□□ 0.5
RFC1P35251 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC1P35251 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.16■□□□□ 0.5
RFC1P35251 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFC1P35251 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.16■□□□□ 0.5
RFC1P35251 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.16■□□□□ 0.5
RFC1P35251 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFC1P35251 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.16■□□□□ 0.5
RFC1P35251 AC091304.2-201ENST00000564639 760 ntBASIC18.16■□□□□ 0.5
RFC1P35251 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.16■□□□□ 0.5
RFC1P35251 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.16■□□□□ 0.5
RFC1P35251 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.16■□□□□ 0.5
RFC1P35251 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RFC1P35251 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC1P35251 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFC1P35251 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFC1P35251 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.16■□□□□ 0.5
RFC1P35251 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.16■□□□□ 0.5
RFC1P35251 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RFC1P35251 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
RFC1P35251 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFC1P35251 AC009053.2-201ENST00000563701 2365 ntBASIC18.16■□□□□ 0.5
RFC1P35251 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.15■□□□□ 0.5
RFC1P35251 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC1P35251 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFC1P35251 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC1P35251 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.15■□□□□ 0.5
RFC1P35251 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.15■□□□□ 0.5
RFC1P35251 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC1P35251 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC1P35251 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.15■□□□□ 0.5
RFC1P35251 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC1P35251 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC1P35251 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.15■□□□□ 0.5
RFC1P35251 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.15■□□□□ 0.5
RFC1P35251 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC1P35251 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC1P35251 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC1P35251 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.15■□□□□ 0.5
RFC1P35251 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC1P35251 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.15■□□□□ 0.5
RFC1P35251 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC1P35251 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
RFC1P35251 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.15■□□□□ 0.5
RFC1P35251 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.15■□□□□ 0.5
RFC1P35251 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.15■□□□□ 0.5
RFC1P35251 CLEC4GP1-201ENST00000596555 870 ntBASIC18.15■□□□□ 0.5
RFC1P35251 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.15■□□□□ 0.5
RFC1P35251 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.15■□□□□ 0.5
RFC1P35251 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC1P35251 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFC1P35251 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.15■□□□□ 0.5
RFC1P35251 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RFC1P35251 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFC1P35251 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms