Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.18■□□□□ 0.5
CHRNA3P32297 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CHRNA3P32297 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA3P32297 AC093525.9-201ENST00000624961 1746 ntBASIC18.18■□□□□ 0.5
CHRNA3P32297 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.17■□□□□ 0.5
CHRNA3P32297 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.17■□□□□ 0.5
CHRNA3P32297 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.17■□□□□ 0.5
CHRNA3P32297 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.17■□□□□ 0.5
CHRNA3P32297 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 AC004870.1-201ENST00000315132 882 ntBASIC18.17■□□□□ 0.5
CHRNA3P32297 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHRNA3P32297 SLC25A1P3-201ENST00000395415 828 ntBASIC18.17■□□□□ 0.5
CHRNA3P32297 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.17■□□□□ 0.5
CHRNA3P32297 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.17■□□□□ 0.5
CHRNA3P32297 KRT16P4-201ENST00000453883 522 ntBASIC18.17■□□□□ 0.5
CHRNA3P32297 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.17■□□□□ 0.5
CHRNA3P32297 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.17■□□□□ 0.5
CHRNA3P32297 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.17■□□□□ 0.5
CHRNA3P32297 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.17■□□□□ 0.5
CHRNA3P32297 BNIP3P18-201ENST00000593976 575 ntBASIC18.17■□□□□ 0.5
CHRNA3P32297 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 AC018695.7-201ENST00000624587 2492 ntBASIC18.17■□□□□ 0.5
CHRNA3P32297 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.17■□□□□ 0.5
CHRNA3P32297 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.17■□□□□ 0.5
CHRNA3P32297 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHRNA3P32297 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHRNA3P32297 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA3P32297 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA3P32297 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CHRNA3P32297 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA3P32297 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA3P32297 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.16■□□□□ 0.5
CHRNA3P32297 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CHRNA3P32297 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA3P32297 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.16■□□□□ 0.5
CHRNA3P32297 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA3P32297 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA3P32297 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA3P32297 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA3P32297 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA3P32297 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA3P32297 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CHRNA3P32297 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA3P32297 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CHRNA3P32297 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA3P32297 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.16■□□□□ 0.5
CHRNA3P32297 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.16■□□□□ 0.5
CHRNA3P32297 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.16■□□□□ 0.5
CHRNA3P32297 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.16■□□□□ 0.5
CHRNA3P32297 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.16■□□□□ 0.5
CHRNA3P32297 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.16■□□□□ 0.5
CHRNA3P32297 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.16■□□□□ 0.5
CHRNA3P32297 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA3P32297 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA3P32297 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA3P32297 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA3P32297 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA3P32297 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA3P32297 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA3P32297 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CHRNA3P32297 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA3P32297 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA3P32297 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA3P32297 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHRNA3P32297 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHRNA3P32297 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA3P32297 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA3P32297 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.16■□□□□ 0.5
CHRNA3P32297 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
CHRNA3P32297 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.16■□□□□ 0.5
CHRNA3P32297 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CHRNA3P32297 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRNA3P32297 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRNA3P32297 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA3P32297 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.15■□□□□ 0.5
CHRNA3P32297 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.15■□□□□ 0.5
CHRNA3P32297 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.15■□□□□ 0.5
CHRNA3P32297 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.15■□□□□ 0.5
CHRNA3P32297 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA3P32297 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHRNA3P32297 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms