Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 AP001059.3-201ENST00000619053 235 ntBASIC19.21■□□□□ 0.67
RARBP10826 AC104581.1-202ENST00000635932 2618 ntBASIC19.21■□□□□ 0.67
RARBP10826 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RARBP10826 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.21■□□□□ 0.67
RARBP10826 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.21■□□□□ 0.67
RARBP10826 TUBB3P1-201ENST00000405796 1332 ntBASIC19.21■□□□□ 0.67
RARBP10826 AKAP8P1-201ENST00000434743 1349 ntBASIC19.21■□□□□ 0.67
RARBP10826 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RARBP10826 AC009113.1-201ENST00000570267 2443 ntBASIC19.21■□□□□ 0.67
RARBP10826 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RARBP10826 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
RARBP10826 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RARBP10826 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
RARBP10826 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARBP10826 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.2■□□□□ 0.66
RARBP10826 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RARBP10826 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.2■□□□□ 0.66
RARBP10826 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.2■□□□□ 0.66
RARBP10826 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARBP10826 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARBP10826 MIR943-201ENST00000401286 94 ntBASIC19.2■□□□□ 0.66
RARBP10826 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RARBP10826 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.2■□□□□ 0.66
RARBP10826 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.2■□□□□ 0.66
RARBP10826 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.2■□□□□ 0.66
RARBP10826 AC107918.2-201ENST00000530817 355 ntBASIC19.2■□□□□ 0.66
RARBP10826 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.2■□□□□ 0.66
RARBP10826 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.2■□□□□ 0.66
RARBP10826 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.2■□□□□ 0.66
RARBP10826 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.2■□□□□ 0.66
RARBP10826 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARBP10826 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARBP10826 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RARBP10826 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.2■□□□□ 0.66
RARBP10826 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.2■□□□□ 0.66
RARBP10826 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARBP10826 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RARBP10826 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.2■□□□□ 0.66
RARBP10826 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
RARBP10826 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RARBP10826 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.2■□□□□ 0.66
RARBP10826 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
RARBP10826 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.2■□□□□ 0.66
RARBP10826 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARBP10826 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARBP10826 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RARBP10826 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RARBP10826 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RARBP10826 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RARBP10826 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.19■□□□□ 0.66
RARBP10826 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RARBP10826 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RARBP10826 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.19■□□□□ 0.66
RARBP10826 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RARBP10826 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RARBP10826 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RARBP10826 FAM58DP-201ENST00000428076 619 ntBASIC19.19■□□□□ 0.66
RARBP10826 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.19■□□□□ 0.66
RARBP10826 KLF2P3-201ENST00000451977 1087 ntBASIC19.19■□□□□ 0.66
RARBP10826 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.19■□□□□ 0.66
RARBP10826 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.19■□□□□ 0.66
RARBP10826 MIR4515-201ENST00000584082 81 ntBASIC19.19■□□□□ 0.66
RARBP10826 AL139327.4-201ENST00000612362 153 ntBASIC19.19■□□□□ 0.66
RARBP10826 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RARBP10826 AF228730.6-201ENST00000641497 218 ntBASIC19.19■□□□□ 0.66
RARBP10826 AC084121.3-201ENST00000641716 218 ntBASIC19.19■□□□□ 0.66
RARBP10826 AC105233.6-201ENST00000642093 218 ntBASIC19.19■□□□□ 0.66
RARBP10826 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.19■□□□□ 0.66
RARBP10826 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RARBP10826 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.19■□□□□ 0.66
RARBP10826 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RARBP10826 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RARBP10826 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.19■□□□□ 0.66
RARBP10826 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.19■□□□□ 0.66
RARBP10826 FLJ13224-201ENST00000313737 1514 ntBASIC19.19■□□□□ 0.66
RARBP10826 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RARBP10826 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RARBP10826 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.19■□□□□ 0.66
RARBP10826 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RARBP10826 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RARBP10826 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RARBP10826 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RARBP10826 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RARBP10826 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RARBP10826 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RARBP10826 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RARBP10826 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.18■□□□□ 0.66
RARBP10826 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RARBP10826 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RARBP10826 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RARBP10826 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.18■□□□□ 0.66
RARBP10826 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RARBP10826 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RARBP10826 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.18■□□□□ 0.66
RARBP10826 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RARBP10826 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.18■□□□□ 0.66
RARBP10826 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RARBP10826 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RARBP10826 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RARBP10826 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms