Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXC6P09630 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXC6P09630 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HOXC6P09630 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
HOXC6P09630 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.34■□□□□ 0.69
HOXC6P09630 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
HOXC6P09630 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC6P09630 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC6P09630 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HOXC6P09630 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HOXC6P09630 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.34■□□□□ 0.69
HOXC6P09630 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXC6P09630 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXC6P09630 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXC6P09630 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.33■□□□□ 0.69
HOXC6P09630 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.33■□□□□ 0.69
HOXC6P09630 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HOXC6P09630 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
HOXC6P09630 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXC6P09630 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HOXC6P09630 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC6P09630 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC6P09630 AC236430.1-201ENST00000402231 743 ntBASIC19.33■□□□□ 0.68
HOXC6P09630 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXC6P09630 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXC6P09630 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXC6P09630 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXC6P09630 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.33■□□□□ 0.68
HOXC6P09630 TERF1P3-201ENST00000505638 1227 ntBASIC19.33■□□□□ 0.68
HOXC6P09630 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.33■□□□□ 0.68
HOXC6P09630 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXC6P09630 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.33■□□□□ 0.68
HOXC6P09630 AC026150.2-201ENST00000564693 1156 ntBASIC19.33■□□□□ 0.68
HOXC6P09630 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC6P09630 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC6P09630 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.33■□□□□ 0.68
HOXC6P09630 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.33■□□□□ 0.68
HOXC6P09630 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
HOXC6P09630 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC6P09630 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC6P09630 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.33■□□□□ 0.68
HOXC6P09630 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXC6P09630 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC6P09630 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.33■□□□□ 0.68
HOXC6P09630 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.33■□□□□ 0.68
HOXC6P09630 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HOXC6P09630 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.33■□□□□ 0.68
HOXC6P09630 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC6P09630 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC6P09630 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HOXC6P09630 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC6P09630 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC6P09630 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC6P09630 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC6P09630 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC6P09630 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HOXC6P09630 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC6P09630 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC6P09630 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC6P09630 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC6P09630 SPDYE14P-201ENST00000442619 822 ntBASIC19.32■□□□□ 0.68
HOXC6P09630 FAM207CP-201ENST00000443486 507 ntBASIC19.32■□□□□ 0.68
HOXC6P09630 TSPY16P-201ENST00000449843 468 ntBASIC19.32■□□□□ 0.68
HOXC6P09630 AC125807.1-201ENST00000483097 614 ntBASIC19.32■□□□□ 0.68
HOXC6P09630 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXC6P09630 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
HOXC6P09630 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC6P09630 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC6P09630 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.32■□□□□ 0.68
HOXC6P09630 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HOXC6P09630 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
HOXC6P09630 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC6P09630 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC6P09630 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HOXC6P09630 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
HOXC6P09630 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC6P09630 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC6P09630 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXC6P09630 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC6P09630 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HOXC6P09630 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC6P09630 AC063926.2-201ENST00000623766 1308 ntBASIC19.31■□□□□ 0.68
HOXC6P09630 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC6P09630 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC6P09630 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC6P09630 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC6P09630 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.31■□□□□ 0.68
HOXC6P09630 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.31■□□□□ 0.68
HOXC6P09630 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXC6P09630 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.31■□□□□ 0.68
HOXC6P09630 IGHV3-62-201ENST00000520057 340 ntBASIC19.31■□□□□ 0.68
HOXC6P09630 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.31■□□□□ 0.68
HOXC6P09630 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.31■□□□□ 0.68
HOXC6P09630 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.31■□□□□ 0.68
HOXC6P09630 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.31■□□□□ 0.68
HOXC6P09630 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.31■□□□□ 0.68
HOXC6P09630 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HOXC6P09630 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.31■□□□□ 0.68
HOXC6P09630 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HOXC6P09630 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms