Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC22.35■■□□□ 1.17
COL5A2P05997 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
COL5A2P05997 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL5A2P05997 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
COL5A2P05997 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC22.34■■□□□ 1.17
COL5A2P05997 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC22.34■■□□□ 1.17
COL5A2P05997 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL5A2P05997 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL5A2P05997 STOM-203ENST00000538954 1257 ntTSL 5 BASIC22.34■■□□□ 1.17
COL5A2P05997 HILS1-202ENST00000545329 423 ntBASIC22.34■■□□□ 1.17
COL5A2P05997 BANF1P1-201ENST00000553684 263 ntBASIC22.34■■□□□ 1.17
COL5A2P05997 RAB34-223ENST00000636154 730 ntTSL 2 BASIC22.34■■□□□ 1.17
COL5A2P05997 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
COL5A2P05997 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
COL5A2P05997 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL5A2P05997 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL5A2P05997 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL5A2P05997 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC22.34■■□□□ 1.17
COL5A2P05997 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
COL5A2P05997 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL5A2P05997 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL5A2P05997 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
COL5A2P05997 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC22.34■■□□□ 1.17
COL5A2P05997 PGF-202ENST00000405431 666 ntTSL 5 BASIC22.34■■□□□ 1.17
COL5A2P05997 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC22.34■■□□□ 1.17
COL5A2P05997 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
COL5A2P05997 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC22.34■■□□□ 1.17
COL5A2P05997 GPR53P-205ENST00000457298 1084 ntBASIC22.34■■□□□ 1.17
COL5A2P05997 AC022494.1-201ENST00000466044 728 ntBASIC22.34■■□□□ 1.17
COL5A2P05997 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC22.34■■□□□ 1.17
COL5A2P05997 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC22.34■■□□□ 1.17
COL5A2P05997 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC22.34■■□□□ 1.17
COL5A2P05997 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC22.34■■□□□ 1.17
COL5A2P05997 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC22.34■■□□□ 1.17
COL5A2P05997 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
COL5A2P05997 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL5A2P05997 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COL5A2P05997 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL5A2P05997 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL5A2P05997 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
COL5A2P05997 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL5A2P05997 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
COL5A2P05997 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
COL5A2P05997 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC22.33■■□□□ 1.17
COL5A2P05997 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL5A2P05997 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL5A2P05997 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
COL5A2P05997 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC22.33■■□□□ 1.16
COL5A2P05997 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC22.33■■□□□ 1.16
COL5A2P05997 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC22.33■■□□□ 1.16
COL5A2P05997 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
COL5A2P05997 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC22.33■■□□□ 1.16
COL5A2P05997 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC22.33■■□□□ 1.16
COL5A2P05997 WASH4P-201ENST00000564273 1246 ntBASIC22.33■■□□□ 1.16
COL5A2P05997 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC22.33■■□□□ 1.16
COL5A2P05997 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC22.33■■□□□ 1.16
COL5A2P05997 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC22.33■■□□□ 1.16
COL5A2P05997 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC22.33■■□□□ 1.16
COL5A2P05997 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
COL5A2P05997 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL5A2P05997 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
COL5A2P05997 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL5A2P05997 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.32■■□□□ 1.16
COL5A2P05997 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COL5A2P05997 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL5A2P05997 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL5A2P05997 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC22.32■■□□□ 1.16
COL5A2P05997 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC22.32■■□□□ 1.16
COL5A2P05997 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC22.32■■□□□ 1.16
COL5A2P05997 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC22.32■■□□□ 1.16
COL5A2P05997 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC22.32■■□□□ 1.16
COL5A2P05997 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC22.32■■□□□ 1.16
COL5A2P05997 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC22.32■■□□□ 1.16
COL5A2P05997 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC22.32■■□□□ 1.16
COL5A2P05997 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC22.32■■□□□ 1.16
COL5A2P05997 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
COL5A2P05997 LINC00896-202ENST00000609602 2128 ntBASIC22.32■■□□□ 1.16
COL5A2P05997 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC22.32■■□□□ 1.16
COL5A2P05997 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC22.32■■□□□ 1.16
COL5A2P05997 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COL5A2P05997 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC22.31■■□□□ 1.16
COL5A2P05997 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL5A2P05997 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL5A2P05997 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.31■■□□□ 1.16
COL5A2P05997 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL5A2P05997 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC22.31■■□□□ 1.16
COL5A2P05997 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC22.31■■□□□ 1.16
COL5A2P05997 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL5A2P05997 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
COL5A2P05997 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COL5A2P05997 HLA-H-201ENST00000383620 1096 ntBASIC22.31■■□□□ 1.16
COL5A2P05997 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC22.31■■□□□ 1.16
COL5A2P05997 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC22.31■■□□□ 1.16
COL5A2P05997 AL080243.2-201ENST00000418783 582 ntBASIC22.31■■□□□ 1.16
COL5A2P05997 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL5A2P05997 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
COL5A2P05997 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC22.31■■□□□ 1.16
COL5A2P05997 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
COL5A2P05997 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC22.31■■□□□ 1.16
COL5A2P05997 PRR29-204ENST00000577953 565 ntTSL 4 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms