Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 ELK2BP-201ENST00000415014 1224 ntBASIC17.45■□□□□ 0.38
HLA-DQB2P05538 LAGE3P1-201ENST00000425356 484 ntBASIC17.45■□□□□ 0.38
HLA-DQB2P05538 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 HNRNPDP1-201ENST00000439535 754 ntBASIC17.45■□□□□ 0.38
HLA-DQB2P05538 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 AC148477.8-201ENST00000624298 468 ntBASIC17.45■□□□□ 0.38
HLA-DQB2P05538 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HLA-DQB2P05538 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 KRT18P67-201ENST00000432816 1264 ntBASIC17.44■□□□□ 0.38
HLA-DQB2P05538 OR7E14P-202ENST00000530490 1290 ntBASIC17.44■□□□□ 0.38
HLA-DQB2P05538 AP002469.2-201ENST00000531724 424 ntBASIC17.44■□□□□ 0.38
HLA-DQB2P05538 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 AC006504.4-201ENST00000592118 1568 ntBASIC17.44■□□□□ 0.38
HLA-DQB2P05538 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 AD000864.1-201ENST00000624076 2295 ntBASIC17.44■□□□□ 0.38
HLA-DQB2P05538 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HLA-DQB2P05538 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 AL121761.2-201ENST00000598007 1648 ntBASIC17.43■□□□□ 0.38
HLA-DQB2P05538 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DQB2P05538 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DQB2P05538 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms