Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.5■□□□□ 0.55
HLA-DRAP01903 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.5■□□□□ 0.55
HLA-DRAP01903 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.5■□□□□ 0.55
HLA-DRAP01903 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.5■□□□□ 0.55
HLA-DRAP01903 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
HLA-DRAP01903 AL773604.1-201ENST00000617417 272 ntBASIC18.5■□□□□ 0.55
HLA-DRAP01903 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.5■□□□□ 0.55
HLA-DRAP01903 AC008735.5-201ENST00000623544 497 ntBASIC18.5■□□□□ 0.55
HLA-DRAP01903 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DRAP01903 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DRAP01903 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DRAP01903 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DRAP01903 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.5■□□□□ 0.55
HLA-DRAP01903 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
HLA-DRAP01903 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.5■□□□□ 0.55
HLA-DRAP01903 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HLA-DRAP01903 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
HLA-DRAP01903 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.5■□□□□ 0.55
HLA-DRAP01903 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.49■□□□□ 0.55
HLA-DRAP01903 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DRAP01903 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DRAP01903 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-DRAP01903 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DRAP01903 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
HLA-DRAP01903 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.49■□□□□ 0.55
HLA-DRAP01903 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.49■□□□□ 0.55
HLA-DRAP01903 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HLA-DRAP01903 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
HLA-DRAP01903 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DRAP01903 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DRAP01903 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DRAP01903 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DRAP01903 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DRAP01903 AC073621.1-201ENST00000392730 636 ntBASIC18.49■□□□□ 0.55
HLA-DRAP01903 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DRAP01903 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DRAP01903 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.49■□□□□ 0.55
HLA-DRAP01903 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.49■□□□□ 0.55
HLA-DRAP01903 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
HLA-DRAP01903 AC124947.2-201ENST00000547118 1133 ntBASIC18.49■□□□□ 0.55
HLA-DRAP01903 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.49■□□□□ 0.55
HLA-DRAP01903 SLC25A6P4-201ENST00000586535 553 ntBASIC18.49■□□□□ 0.55
HLA-DRAP01903 AL049840.3-201ENST00000602669 611 ntBASIC18.49■□□□□ 0.55
HLA-DRAP01903 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DRAP01903 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DRAP01903 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.49■□□□□ 0.55
HLA-DRAP01903 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DRAP01903 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.49■□□□□ 0.55
HLA-DRAP01903 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DRAP01903 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DRAP01903 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
HLA-DRAP01903 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DRAP01903 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DRAP01903 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HLA-DRAP01903 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DRAP01903 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HLA-DRAP01903 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DRAP01903 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HLA-DRAP01903 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DRAP01903 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HLA-DRAP01903 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DRAP01903 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DRAP01903 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DRAP01903 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HLA-DRAP01903 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HLA-DRAP01903 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DRAP01903 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-DRAP01903 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DRAP01903 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DRAP01903 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.48■□□□□ 0.55
HLA-DRAP01903 PTCHD3P3-201ENST00000403073 906 ntBASIC18.48■□□□□ 0.55
HLA-DRAP01903 AL031284.1-201ENST00000419297 478 ntBASIC18.48■□□□□ 0.55
HLA-DRAP01903 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.48■□□□□ 0.55
HLA-DRAP01903 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
HLA-DRAP01903 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.48■□□□□ 0.55
HLA-DRAP01903 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
HLA-DRAP01903 RNA5SP419-201ENST00000515908 135 ntBASIC18.48■□□□□ 0.55
HLA-DRAP01903 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-DRAP01903 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.48■□□□□ 0.55
HLA-DRAP01903 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-DRAP01903 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DRAP01903 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.48■□□□□ 0.55
HLA-DRAP01903 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DRAP01903 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.48■□□□□ 0.55
HLA-DRAP01903 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HLA-DRAP01903 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DRAP01903 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DRAP01903 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DRAP01903 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DRAP01903 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
HLA-DRAP01903 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
HLA-DRAP01903 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HLA-DRAP01903 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DRAP01903 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HLA-DRAP01903 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DRAP01903 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DRAP01903 AP002414.3-201ENST00000589352 1468 ntBASIC18.47■□□□□ 0.55
HLA-DRAP01903 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HLA-DRAP01903 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.47■□□□□ 0.55
HLA-DRAP01903 AC243591.1-201ENST00000452967 1364 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms