Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC099336.1-202ENST00000602961 463 ntBASIC19.32■□□□□ 0.68
ACTN4O43707 AL445228.2-201ENST00000605589 952 ntBASIC19.32■□□□□ 0.68
ACTN4O43707 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.32■□□□□ 0.68
ACTN4O43707 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.32■□□□□ 0.68
ACTN4O43707 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ACTN4O43707 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACTN4O43707 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ACTN4O43707 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ACTN4O43707 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACTN4O43707 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
ACTN4O43707 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ACTN4O43707 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACTN4O43707 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ACTN4O43707 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.31■□□□□ 0.68
ACTN4O43707 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.31■□□□□ 0.68
ACTN4O43707 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ACTN4O43707 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ACTN4O43707 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.31■□□□□ 0.68
ACTN4O43707 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ACTN4O43707 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.31■□□□□ 0.68
ACTN4O43707 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.31■□□□□ 0.68
ACTN4O43707 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.31■□□□□ 0.68
ACTN4O43707 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
ACTN4O43707 AL020989.1-201ENST00000422979 469 ntBASIC19.31■□□□□ 0.68
ACTN4O43707 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.31■□□□□ 0.68
ACTN4O43707 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.31■□□□□ 0.68
ACTN4O43707 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 MIR5100-201ENST00000579544 119 ntBASIC19.31■□□□□ 0.68
ACTN4O43707 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.31■□□□□ 0.68
ACTN4O43707 AC073592.4-201ENST00000623827 446 ntBASIC19.31■□□□□ 0.68
ACTN4O43707 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.31■□□□□ 0.68
ACTN4O43707 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.31■□□□□ 0.68
ACTN4O43707 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 SIGLEC16-201ENST00000599858 1437 ntBASIC19.31■□□□□ 0.68
ACTN4O43707 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ACTN4O43707 AC092171.3-201ENST00000610122 2651 ntBASIC19.3■□□□□ 0.68
ACTN4O43707 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACTN4O43707 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ACTN4O43707 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACTN4O43707 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACTN4O43707 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.3■□□□□ 0.68
ACTN4O43707 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ACTN4O43707 ACTG1P4-201ENST00000425123 1122 ntBASIC19.3■□□□□ 0.68
ACTN4O43707 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.3■□□□□ 0.68
ACTN4O43707 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ACTN4O43707 ABCD1P5-201ENST00000445663 754 ntBASIC19.3■□□□□ 0.68
ACTN4O43707 DUX4L17-201ENST00000557360 1267 ntBASIC19.3■□□□□ 0.68
ACTN4O43707 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.3■□□□□ 0.68
ACTN4O43707 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.3■□□□□ 0.68
ACTN4O43707 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.3■□□□□ 0.68
ACTN4O43707 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACTN4O43707 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.3■□□□□ 0.68
ACTN4O43707 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ACTN4O43707 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACTN4O43707 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACTN4O43707 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACTN4O43707 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ACTN4O43707 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACTN4O43707 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ACTN4O43707 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.29■□□□□ 0.68
ACTN4O43707 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ACTN4O43707 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ACTN4O43707 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.29■□□□□ 0.68
ACTN4O43707 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACTN4O43707 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ACTN4O43707 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ACTN4O43707 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACTN4O43707 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ACTN4O43707 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACTN4O43707 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ACTN4O43707 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACTN4O43707 NUS1P2-201ENST00000417358 873 ntBASIC19.29■□□□□ 0.68
ACTN4O43707 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.29■□□□□ 0.68
ACTN4O43707 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.29■□□□□ 0.68
ACTN4O43707 SIGLEC30P-201ENST00000455569 941 ntBASIC19.29■□□□□ 0.68
ACTN4O43707 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.29■□□□□ 0.68
ACTN4O43707 AC091076.1-201ENST00000610741 619 ntBASIC19.29■□□□□ 0.68
ACTN4O43707 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ACTN4O43707 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.29■□□□□ 0.68
ACTN4O43707 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ACTN4O43707 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms