Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC145285.3-201ENST00000564603 959 ntBASIC19.37■□□□□ 0.69
CHMP2AO43633 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CHMP2AO43633 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.37■□□□□ 0.69
CHMP2AO43633 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2AO43633 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2AO43633 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.37■□□□□ 0.69
CHMP2AO43633 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2AO43633 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2AO43633 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2AO43633 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2AO43633 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.37■□□□□ 0.69
CHMP2AO43633 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.37■□□□□ 0.69
CHMP2AO43633 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.37■□□□□ 0.69
CHMP2AO43633 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2AO43633 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CHMP2AO43633 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP2AO43633 PI4KAP1-204ENST00000612579 1703 ntBASIC19.37■□□□□ 0.69
CHMP2AO43633 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CHMP2AO43633 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2AO43633 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2AO43633 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2AO43633 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2AO43633 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2AO43633 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2AO43633 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2AO43633 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.36■□□□□ 0.69
CHMP2AO43633 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2AO43633 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2AO43633 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.36■□□□□ 0.69
CHMP2AO43633 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2AO43633 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.36■□□□□ 0.69
CHMP2AO43633 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.36■□□□□ 0.69
CHMP2AO43633 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2AO43633 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.36■□□□□ 0.69
CHMP2AO43633 AC007967.2-201ENST00000432613 625 ntBASIC19.36■□□□□ 0.69
CHMP2AO43633 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.36■□□□□ 0.69
CHMP2AO43633 POLD2P1-201ENST00000511220 997 ntBASIC19.36■□□□□ 0.69
CHMP2AO43633 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.36■□□□□ 0.69
CHMP2AO43633 MIR4751-201ENST00000578027 74 ntBASIC19.36■□□□□ 0.69
CHMP2AO43633 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2AO43633 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHMP2AO43633 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.36■□□□□ 0.69
CHMP2AO43633 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2AO43633 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2AO43633 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2AO43633 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2AO43633 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2AO43633 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2AO43633 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP2AO43633 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
CHMP2AO43633 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
CHMP2AO43633 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.35■□□□□ 0.69
CHMP2AO43633 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2AO43633 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2AO43633 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2AO43633 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2AO43633 AC139713.2-201ENST00000641328 2723 ntBASIC19.35■□□□□ 0.69
CHMP2AO43633 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2AO43633 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2AO43633 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.35■□□□□ 0.69
CHMP2AO43633 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2AO43633 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2AO43633 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2AO43633 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CHMP2AO43633 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2AO43633 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.35■□□□□ 0.69
CHMP2AO43633 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2AO43633 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.35■□□□□ 0.69
CHMP2AO43633 AC008667.4-201ENST00000607370 168 ntBASIC19.35■□□□□ 0.69
CHMP2AO43633 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CHMP2AO43633 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.35■□□□□ 0.69
CHMP2AO43633 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CHMP2AO43633 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.35■□□□□ 0.69
CHMP2AO43633 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2AO43633 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CHMP2AO43633 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP2AO43633 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CHMP2AO43633 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CHMP2AO43633 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.35■□□□□ 0.69
CHMP2AO43633 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2AO43633 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.34■□□□□ 0.69
CHMP2AO43633 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CHMP2AO43633 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2AO43633 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CHMP2AO43633 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.34■□□□□ 0.69
CHMP2AO43633 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2AO43633 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2AO43633 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2AO43633 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.34■□□□□ 0.69
CHMP2AO43633 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2AO43633 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.34■□□□□ 0.69
CHMP2AO43633 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CHMP2AO43633 IGHV3-65-201ENST00000523210 341 ntBASIC19.34■□□□□ 0.69
CHMP2AO43633 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2AO43633 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2AO43633 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.34■□□□□ 0.69
CHMP2AO43633 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2AO43633 AC004790.2-201ENST00000623588 572 ntBASIC19.34■□□□□ 0.69
CHMP2AO43633 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHMP2AO43633 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms