Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
NDUFA1O15239 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFA1O15239 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
NDUFA1O15239 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
NDUFA1O15239 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFA1O15239 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
NDUFA1O15239 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
NDUFA1O15239 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
NDUFA1O15239 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFA1O15239 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
NDUFA1O15239 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFA1O15239 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC11.83□□□□□ -0.52
NDUFA1O15239 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC11.83□□□□□ -0.52
NDUFA1O15239 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFA1O15239 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFA1O15239 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC11.83□□□□□ -0.52
NDUFA1O15239 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFA1O15239 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC11.83□□□□□ -0.52
NDUFA1O15239 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
NDUFA1O15239 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
NDUFA1O15239 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
NDUFA1O15239 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
NDUFA1O15239 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC11.82□□□□□ -0.52
NDUFA1O15239 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC11.82□□□□□ -0.52
NDUFA1O15239 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC11.82□□□□□ -0.52
NDUFA1O15239 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC11.82□□□□□ -0.52
NDUFA1O15239 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC11.82□□□□□ -0.52
NDUFA1O15239 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
NDUFA1O15239 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC11.82□□□□□ -0.52
NDUFA1O15239 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
NDUFA1O15239 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 CRAT-202ENST00000393384 973 ntTSL 2 BASIC11.82□□□□□ -0.52
NDUFA1O15239 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC11.82□□□□□ -0.52
NDUFA1O15239 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC11.82□□□□□ -0.52
NDUFA1O15239 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC11.82□□□□□ -0.52
NDUFA1O15239 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC11.82□□□□□ -0.52
NDUFA1O15239 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC11.82□□□□□ -0.52
NDUFA1O15239 AC113404.2-201ENST00000507884 177 ntBASIC11.82□□□□□ -0.52
NDUFA1O15239 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC11.82□□□□□ -0.52
NDUFA1O15239 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC11.82□□□□□ -0.52
NDUFA1O15239 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 NT5C-210ENST00000582160 860 ntTSL 2 BASIC11.82□□□□□ -0.52
NDUFA1O15239 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC11.82□□□□□ -0.52
NDUFA1O15239 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
NDUFA1O15239 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC11.82□□□□□ -0.52
NDUFA1O15239 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC11.82□□□□□ -0.52
NDUFA1O15239 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 AC126755.1-201ENST00000525846 6405 ntBASIC11.82□□□□□ -0.52
NDUFA1O15239 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
NDUFA1O15239 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC11.82□□□□□ -0.52
NDUFA1O15239 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
NDUFA1O15239 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
NDUFA1O15239 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC11.82□□□□□ -0.52
NDUFA1O15239 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC11.81□□□□□ -0.52
NDUFA1O15239 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC11.81□□□□□ -0.52
NDUFA1O15239 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
NDUFA1O15239 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC11.81□□□□□ -0.52
NDUFA1O15239 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
NDUFA1O15239 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC11.81□□□□□ -0.52
NDUFA1O15239 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms