Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.4■□□□□ 0.22
CASQ2O14958 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.4■□□□□ 0.22
CASQ2O14958 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CASQ2O14958 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CASQ2O14958 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CASQ2O14958 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASQ2O14958 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CASQ2O14958 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CASQ2O14958 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASQ2O14958 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CASQ2O14958 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASQ2O14958 AL136379.1-201ENST00000623471 2642 ntBASIC16.39■□□□□ 0.21
CASQ2O14958 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASQ2O14958 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CASQ2O14958 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CASQ2O14958 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CASQ2O14958 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASQ2O14958 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CASQ2O14958 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.39■□□□□ 0.21
CASQ2O14958 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CASQ2O14958 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.39■□□□□ 0.21
CASQ2O14958 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.39■□□□□ 0.21
CASQ2O14958 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CASQ2O14958 MIR4758-201ENST00000577688 71 ntBASIC16.39■□□□□ 0.21
CASQ2O14958 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.39■□□□□ 0.21
CASQ2O14958 AL353708.3-201ENST00000610272 989 ntBASIC16.39■□□□□ 0.21
CASQ2O14958 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.39■□□□□ 0.21
CASQ2O14958 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CASQ2O14958 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CASQ2O14958 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CASQ2O14958 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASQ2O14958 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.39■□□□□ 0.21
CASQ2O14958 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASQ2O14958 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CASQ2O14958 AC079328.2-201ENST00000561241 3354 ntBASIC16.39■□□□□ 0.21
CASQ2O14958 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASQ2O14958 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CASQ2O14958 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CASQ2O14958 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASQ2O14958 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASQ2O14958 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASQ2O14958 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASQ2O14958 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.39■□□□□ 0.21
CASQ2O14958 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CASQ2O14958 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASQ2O14958 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASQ2O14958 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CASQ2O14958 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASQ2O14958 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASQ2O14958 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CASQ2O14958 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.38■□□□□ 0.21
CASQ2O14958 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASQ2O14958 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASQ2O14958 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASQ2O14958 AC097376.2-205ENST00000610159 5334 ntBASIC16.38■□□□□ 0.21
CASQ2O14958 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CASQ2O14958 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.38■□□□□ 0.21
CASQ2O14958 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.38■□□□□ 0.21
CASQ2O14958 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASQ2O14958 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASQ2O14958 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.38■□□□□ 0.21
CASQ2O14958 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASQ2O14958 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASQ2O14958 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CASQ2O14958 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
CASQ2O14958 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CASQ2O14958 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CASQ2O14958 MIR663A-201ENST00000385250 93 ntBASIC16.38■□□□□ 0.21
CASQ2O14958 KSR1P1-201ENST00000446298 240 ntBASIC16.38■□□□□ 0.21
CASQ2O14958 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CASQ2O14958 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.38■□□□□ 0.21
CASQ2O14958 RPS2P4-201ENST00000476944 856 ntBASIC16.38■□□□□ 0.21
CASQ2O14958 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CASQ2O14958 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.38■□□□□ 0.21
CASQ2O14958 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.38■□□□□ 0.21
CASQ2O14958 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.38■□□□□ 0.21
CASQ2O14958 MIR4674-201ENST00000582457 87 ntBASIC16.38■□□□□ 0.21
CASQ2O14958 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.38■□□□□ 0.21
CASQ2O14958 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.38■□□□□ 0.21
CASQ2O14958 AL139327.4-201ENST00000612362 153 ntBASIC16.38■□□□□ 0.21
CASQ2O14958 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
CASQ2O14958 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.38■□□□□ 0.21
CASQ2O14958 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CASQ2O14958 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CASQ2O14958 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.38■□□□□ 0.21
CASQ2O14958 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CASQ2O14958 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASQ2O14958 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CASQ2O14958 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASQ2O14958 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CASQ2O14958 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CASQ2O14958 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.38■□□□□ 0.21
CASQ2O14958 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CASQ2O14958 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CASQ2O14958 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms