Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN4O14493 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN4O14493 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CLDN4O14493 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.23■□□□□ 0.19
CLDN4O14493 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CLDN4O14493 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.23■□□□□ 0.19
CLDN4O14493 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CLDN4O14493 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDN4O14493 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CLDN4O14493 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN4O14493 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDN4O14493 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN4O14493 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDN4O14493 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CLDN4O14493 NFIC-211ENST00000641145 8399 ntBASIC16.23■□□□□ 0.19
CLDN4O14493 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDN4O14493 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN4O14493 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN4O14493 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN4O14493 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLDN4O14493 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CLDN4O14493 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN4O14493 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN4O14493 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN4O14493 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN4O14493 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN4O14493 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN4O14493 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CLDN4O14493 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN4O14493 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN4O14493 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN4O14493 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.22■□□□□ 0.19
CLDN4O14493 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.22■□□□□ 0.19
CLDN4O14493 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN4O14493 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN4O14493 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLDN4O14493 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN4O14493 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLDN4O14493 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN4O14493 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN4O14493 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN4O14493 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.22■□□□□ 0.19
CLDN4O14493 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.22■□□□□ 0.19
CLDN4O14493 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN4O14493 GPR89P-201ENST00000407924 1495 ntBASIC16.22■□□□□ 0.19
CLDN4O14493 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDN4O14493 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDN4O14493 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN4O14493 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN4O14493 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.21■□□□□ 0.19
CLDN4O14493 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN4O14493 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN4O14493 HLA-A-201ENST00000376802 1334 ntBASIC16.21■□□□□ 0.19
CLDN4O14493 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN4O14493 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CLDN4O14493 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN4O14493 AC116353.5-201ENST00000638148 1699 ntBASIC16.21■□□□□ 0.19
CLDN4O14493 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN4O14493 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN4O14493 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN4O14493 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN4O14493 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CLDN4O14493 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN4O14493 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CLDN4O14493 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CLDN4O14493 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CLDN4O14493 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
CLDN4O14493 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CLDN4O14493 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN4O14493 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN4O14493 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN4O14493 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN4O14493 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN4O14493 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN4O14493 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
CLDN4O14493 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN4O14493 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.21■□□□□ 0.19
CLDN4O14493 AC136632.2-201ENST00000512891 861 ntBASIC16.21■□□□□ 0.19
CLDN4O14493 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.21■□□□□ 0.19
CLDN4O14493 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN4O14493 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CLDN4O14493 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN4O14493 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN4O14493 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN4O14493 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN4O14493 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN4O14493 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN4O14493 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN4O14493 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN4O14493 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN4O14493 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.21■□□□□ 0.18
CLDN4O14493 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN4O14493 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
CLDN4O14493 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CLDN4O14493 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CLDN4O14493 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN4O14493 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms