Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.36■□□□□ 0.69
DDX39AO00148 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.36■□□□□ 0.69
DDX39AO00148 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.36■□□□□ 0.69
DDX39AO00148 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX39AO00148 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX39AO00148 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.36■□□□□ 0.69
DDX39AO00148 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
DDX39AO00148 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX39AO00148 CROCCP2-202ENST00000412962 2773 ntBASIC19.36■□□□□ 0.69
DDX39AO00148 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.36■□□□□ 0.69
DDX39AO00148 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
DDX39AO00148 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.35■□□□□ 0.69
DDX39AO00148 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX39AO00148 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX39AO00148 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX39AO00148 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DDX39AO00148 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.35■□□□□ 0.69
DDX39AO00148 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX39AO00148 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX39AO00148 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX39AO00148 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DDX39AO00148 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX39AO00148 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
DDX39AO00148 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.35■□□□□ 0.69
DDX39AO00148 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.35■□□□□ 0.69
DDX39AO00148 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.35■□□□□ 0.69
DDX39AO00148 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.35■□□□□ 0.69
DDX39AO00148 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.35■□□□□ 0.69
DDX39AO00148 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.35■□□□□ 0.69
DDX39AO00148 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.35■□□□□ 0.69
DDX39AO00148 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DDX39AO00148 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DDX39AO00148 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX39AO00148 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX39AO00148 AL138688.1-201ENST00000624851 1594 ntBASIC19.35■□□□□ 0.69
DDX39AO00148 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.35■□□□□ 0.69
DDX39AO00148 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DDX39AO00148 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX39AO00148 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
DDX39AO00148 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX39AO00148 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.35■□□□□ 0.69
DDX39AO00148 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
DDX39AO00148 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DDX39AO00148 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
DDX39AO00148 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
DDX39AO00148 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.34■□□□□ 0.69
DDX39AO00148 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX39AO00148 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX39AO00148 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DDX39AO00148 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.34■□□□□ 0.69
DDX39AO00148 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX39AO00148 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.34■□□□□ 0.69
DDX39AO00148 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX39AO00148 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DDX39AO00148 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
DDX39AO00148 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX39AO00148 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
DDX39AO00148 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
DDX39AO00148 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.34■□□□□ 0.69
DDX39AO00148 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.34■□□□□ 0.69
DDX39AO00148 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.34■□□□□ 0.69
DDX39AO00148 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.34■□□□□ 0.69
DDX39AO00148 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
DDX39AO00148 OR7E47P-204ENST00000575924 449 ntBASIC19.34■□□□□ 0.69
DDX39AO00148 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
DDX39AO00148 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX39AO00148 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DDX39AO00148 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.34■□□□□ 0.69
DDX39AO00148 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
DDX39AO00148 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
DDX39AO00148 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.34■□□□□ 0.69
DDX39AO00148 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.34■□□□□ 0.69
DDX39AO00148 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.34■□□□□ 0.69
DDX39AO00148 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX39AO00148 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
DDX39AO00148 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.34■□□□□ 0.69
DDX39AO00148 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX39AO00148 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX39AO00148 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
DDX39AO00148 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DDX39AO00148 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
DDX39AO00148 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
DDX39AO00148 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.33■□□□□ 0.69
DDX39AO00148 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
DDX39AO00148 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
DDX39AO00148 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DDX39AO00148 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
DDX39AO00148 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
DDX39AO00148 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DDX39AO00148 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
DDX39AO00148 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX39AO00148 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
DDX39AO00148 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
DDX39AO00148 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX39AO00148 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.33■□□□□ 0.68
DDX39AO00148 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.33■□□□□ 0.68
DDX39AO00148 GGTLC5P-201ENST00000617623 998 ntBASIC19.33■□□□□ 0.68
DDX39AO00148 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DDX39AO00148 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.33■□□□□ 0.68
DDX39AO00148 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms