Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 ELK2BP-201ENST00000415014 1224 ntBASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 AC002558.1-201ENST00000488906 803 ntBASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 AL139424.1-201ENST00000607572 797 ntBASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPIPA2E9PIF3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NPIPA2E9PIF3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NPIPA2E9PIF3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
NPIPA2E9PIF3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
NPIPA2E9PIF3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.71■□□□□ 0.1
NPIPA2E9PIF3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 MYCLP1-201ENST00000372451 1075 ntBASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 AC005104.2-201ENST00000427818 678 ntBASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 AC040169.1-201ENST00000565382 521 ntBASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 AC010327.4-202ENST00000591484 748 ntBASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 PCDHB18P-201ENST00000524813 2368 ntBASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 LINC00896-202ENST00000609602 2128 ntBASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPA2E9PIF3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 AC023274.1-201ENST00000418278 595 ntBASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 STK25P1-201ENST00000585406 838 ntBASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 AC064836.3-201ENST00000607928 673 ntBASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 AC097637.2-201ENST00000624096 1997 ntBASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.69■□□□□ 0.1
NPIPA2E9PIF3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
NPIPA2E9PIF3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms