Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 AC097374.2-201ENST00000618617 1306 ntBASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
TRDV1A0A1B0GX56 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 AC006538.1-201ENST00000567905 1585 ntBASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 AC104640.1-201ENST00000562617 2109 ntBASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 ALOX12P2-203ENST00000570921 1945 ntBASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 RBM17P1-201ENST00000453646 1190 ntBASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 FITM1-202ENST00000559294 800 ntBASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 C2orf69P3-201ENST00000565542 1120 ntBASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRDV1A0A1B0GX56 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 AL645728.1-201ENST00000366221 2101 ntBASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 AC012618.2-201ENST00000428058 849 ntBASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 MTCL1P1-201ENST00000446207 792 ntBASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 AL512604.3-201ENST00000569583 964 ntBASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 AL049637.2-201ENST00000641778 930 ntBASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRDV1A0A1B0GX56 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms