Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
ARFGEF1Q9Y6D6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC30.24■■■□□ 2.43
ARFGEF1Q9Y6D6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
ARFGEF1Q9Y6D6 AL136116.3-201ENST00000402907 1138 ntBASIC30.24■■■□□ 2.43
ARFGEF1Q9Y6D6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC30.24■■■□□ 2.43
ARFGEF1Q9Y6D6 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
ARFGEF1Q9Y6D6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.24■■■□□ 2.43
ARFGEF1Q9Y6D6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
ARFGEF1Q9Y6D6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC30.23■■■□□ 2.43
ARFGEF1Q9Y6D6 AP002414.2-202ENST00000590929 1450 ntBASIC30.23■■■□□ 2.43
ARFGEF1Q9Y6D6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC30.22■■■□□ 2.43
ARFGEF1Q9Y6D6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.22■■■□□ 2.43
ARFGEF1Q9Y6D6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC30.22■■■□□ 2.43
ARFGEF1Q9Y6D6 AC021242.3-201ENST00000607598 1377 ntBASIC30.21■■■□□ 2.43
ARFGEF1Q9Y6D6 WHAMMP3-201ENST00000611636 1609 ntBASIC30.21■■■□□ 2.43
ARFGEF1Q9Y6D6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
ARFGEF1Q9Y6D6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC30.21■■■□□ 2.43
ARFGEF1Q9Y6D6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC30.21■■■□□ 2.43
ARFGEF1Q9Y6D6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC30.21■■■□□ 2.43
ARFGEF1Q9Y6D6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.21■■■□□ 2.43
ARFGEF1Q9Y6D6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC30.21■■■□□ 2.43
ARFGEF1Q9Y6D6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.21■■■□□ 2.43
ARFGEF1Q9Y6D6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.21■■■□□ 2.43
ARFGEF1Q9Y6D6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
ARFGEF1Q9Y6D6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC30.2■■■□□ 2.43
ARFGEF1Q9Y6D6 AL117332.1-201ENST00000622628 974 ntBASIC30.2■■■□□ 2.43
ARFGEF1Q9Y6D6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC30.19■■■□□ 2.42
ARFGEF1Q9Y6D6 KRT18P24-201ENST00000344739 1156 ntBASIC30.19■■■□□ 2.42
ARFGEF1Q9Y6D6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC30.19■■■□□ 2.42
ARFGEF1Q9Y6D6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC30.19■■■□□ 2.42
ARFGEF1Q9Y6D6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC30.19■■■□□ 2.42
ARFGEF1Q9Y6D6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
ARFGEF1Q9Y6D6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
ARFGEF1Q9Y6D6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
ARFGEF1Q9Y6D6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
ARFGEF1Q9Y6D6 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ARFGEF1Q9Y6D6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC30.17■■■□□ 2.42
ARFGEF1Q9Y6D6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC30.17■■■□□ 2.42
ARFGEF1Q9Y6D6 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.17■■■□□ 2.42
ARFGEF1Q9Y6D6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ARFGEF1Q9Y6D6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
ARFGEF1Q9Y6D6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
ARFGEF1Q9Y6D6 TSPY9P-201ENST00000440215 945 ntBASIC30.17■■■□□ 2.42
ARFGEF1Q9Y6D6 TSPY11P-201ENST00000442607 1045 ntBASIC30.17■■■□□ 2.42
ARFGEF1Q9Y6D6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.17■■■□□ 2.42
ARFGEF1Q9Y6D6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
ARFGEF1Q9Y6D6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
ARFGEF1Q9Y6D6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
ARFGEF1Q9Y6D6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC30.15■■■□□ 2.42
ARFGEF1Q9Y6D6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
ARFGEF1Q9Y6D6 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.15■■■□□ 2.42
ARFGEF1Q9Y6D6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
ARFGEF1Q9Y6D6 ST7-AS1-201ENST00000456775 1889 ntBASIC30.15■■■□□ 2.42
ARFGEF1Q9Y6D6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
ARFGEF1Q9Y6D6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.14■■■□□ 2.42
ARFGEF1Q9Y6D6 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
ARFGEF1Q9Y6D6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC30.14■■■□□ 2.42
ARFGEF1Q9Y6D6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
ARFGEF1Q9Y6D6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC30.14■■■□□ 2.42
ARFGEF1Q9Y6D6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC30.13■■■□□ 2.41
ARFGEF1Q9Y6D6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC30.13■■■□□ 2.41
ARFGEF1Q9Y6D6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
ARFGEF1Q9Y6D6 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ARFGEF1Q9Y6D6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.12■■■□□ 2.41
ARFGEF1Q9Y6D6 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
ARFGEF1Q9Y6D6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
ARFGEF1Q9Y6D6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC30.11■■■□□ 2.41
ARFGEF1Q9Y6D6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
ARFGEF1Q9Y6D6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
ARFGEF1Q9Y6D6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.1■■■□□ 2.41
ARFGEF1Q9Y6D6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC30.1■■■□□ 2.41
ARFGEF1Q9Y6D6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC30.1■■■□□ 2.41
ARFGEF1Q9Y6D6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC30.1■■■□□ 2.41
ARFGEF1Q9Y6D6 MIR4466-201ENST00000606121 54 ntBASIC30.1■■■□□ 2.41
ARFGEF1Q9Y6D6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
ARFGEF1Q9Y6D6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.1■■■□□ 2.41
ARFGEF1Q9Y6D6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.1■■■□□ 2.41
ARFGEF1Q9Y6D6 AC092028.1-203ENST00000608262 953 ntBASIC30.1■■■□□ 2.41
ARFGEF1Q9Y6D6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
ARFGEF1Q9Y6D6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
ARFGEF1Q9Y6D6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC30.09■■■□□ 2.41
ARFGEF1Q9Y6D6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC30.09■■■□□ 2.41
ARFGEF1Q9Y6D6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC30.08■■■□□ 2.41
ARFGEF1Q9Y6D6 AC096631.2-201ENST00000436136 790 ntBASIC30.08■■■□□ 2.41
ARFGEF1Q9Y6D6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC30.08■■■□□ 2.41
ARFGEF1Q9Y6D6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
ARFGEF1Q9Y6D6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
ARFGEF1Q9Y6D6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
ARFGEF1Q9Y6D6 MIR4281-201ENST00000580852 62 ntBASIC30.08■■■□□ 2.41
ARFGEF1Q9Y6D6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
ARFGEF1Q9Y6D6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC30.07■■■□□ 2.4
ARFGEF1Q9Y6D6 AL512631.2-201ENST00000604634 923 ntBASIC30.07■■■□□ 2.4
ARFGEF1Q9Y6D6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC30.06■■■□□ 2.4
ARFGEF1Q9Y6D6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
ARFGEF1Q9Y6D6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
ARFGEF1Q9Y6D6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
ARFGEF1Q9Y6D6 AC026271.2-201ENST00000428091 497 ntBASIC30.06■■■□□ 2.4
ARFGEF1Q9Y6D6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC30.06■■■□□ 2.4
ARFGEF1Q9Y6D6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
ARFGEF1Q9Y6D6 ZNRF2P3-201ENST00000424200 374 ntBASIC30.05■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms