Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
HCFC2Q9Y5Z7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC25.71■■□□□ 1.71
HCFC2Q9Y5Z7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
HCFC2Q9Y5Z7 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.71■■□□□ 1.71
HCFC2Q9Y5Z7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
HCFC2Q9Y5Z7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
HCFC2Q9Y5Z7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
HCFC2Q9Y5Z7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.7■■□□□ 1.71
HCFC2Q9Y5Z7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.7■■□□□ 1.71
HCFC2Q9Y5Z7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
HCFC2Q9Y5Z7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
HCFC2Q9Y5Z7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
HCFC2Q9Y5Z7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
HCFC2Q9Y5Z7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.7■■□□□ 1.7
HCFC2Q9Y5Z7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
HCFC2Q9Y5Z7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
HCFC2Q9Y5Z7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
HCFC2Q9Y5Z7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.69■■□□□ 1.7
HCFC2Q9Y5Z7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.69■■□□□ 1.7
HCFC2Q9Y5Z7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
HCFC2Q9Y5Z7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
HCFC2Q9Y5Z7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
HCFC2Q9Y5Z7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.68■■□□□ 1.7
HCFC2Q9Y5Z7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.68■■□□□ 1.7
HCFC2Q9Y5Z7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
HCFC2Q9Y5Z7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
HCFC2Q9Y5Z7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
HCFC2Q9Y5Z7 AC008406.3-201ENST00000620001 1374 ntBASIC25.67■■□□□ 1.7
HCFC2Q9Y5Z7 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
HCFC2Q9Y5Z7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
HCFC2Q9Y5Z7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.66■■□□□ 1.7
HCFC2Q9Y5Z7 KRT125P-201ENST00000546827 989 ntBASIC25.66■■□□□ 1.7
HCFC2Q9Y5Z7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
HCFC2Q9Y5Z7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
HCFC2Q9Y5Z7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
HCFC2Q9Y5Z7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
HCFC2Q9Y5Z7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.65■■□□□ 1.7
HCFC2Q9Y5Z7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
HCFC2Q9Y5Z7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
HCFC2Q9Y5Z7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
HCFC2Q9Y5Z7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
HCFC2Q9Y5Z7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
HCFC2Q9Y5Z7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.64■■□□□ 1.7
HCFC2Q9Y5Z7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
HCFC2Q9Y5Z7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
HCFC2Q9Y5Z7 BX664725.1-201ENST00000438252 379 ntBASIC25.64■■□□□ 1.7
HCFC2Q9Y5Z7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
HCFC2Q9Y5Z7 MIR4787-201ENST00000607364 84 ntBASIC25.64■■□□□ 1.7
HCFC2Q9Y5Z7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
HCFC2Q9Y5Z7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
HCFC2Q9Y5Z7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
HCFC2Q9Y5Z7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.63■■□□□ 1.69
HCFC2Q9Y5Z7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
HCFC2Q9Y5Z7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.62■■□□□ 1.69
HCFC2Q9Y5Z7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
HCFC2Q9Y5Z7 AC139426.1-201ENST00000568218 2529 ntBASIC25.62■■□□□ 1.69
HCFC2Q9Y5Z7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
HCFC2Q9Y5Z7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC25.62■■□□□ 1.69
HCFC2Q9Y5Z7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC25.62■■□□□ 1.69
HCFC2Q9Y5Z7 AC022616.5-201ENST00000518796 181 ntBASIC25.62■■□□□ 1.69
HCFC2Q9Y5Z7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.62■■□□□ 1.69
HCFC2Q9Y5Z7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HCFC2Q9Y5Z7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HCFC2Q9Y5Z7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.61■■□□□ 1.69
HCFC2Q9Y5Z7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
HCFC2Q9Y5Z7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HCFC2Q9Y5Z7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HCFC2Q9Y5Z7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
HCFC2Q9Y5Z7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
HCFC2Q9Y5Z7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
HCFC2Q9Y5Z7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
HCFC2Q9Y5Z7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
HCFC2Q9Y5Z7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
HCFC2Q9Y5Z7 KRT18P10-201ENST00000388836 1287 ntBASIC25.59■■□□□ 1.69
HCFC2Q9Y5Z7 UNC93B8-201ENST00000511903 705 ntBASIC25.59■■□□□ 1.69
HCFC2Q9Y5Z7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.58■■□□□ 1.69
HCFC2Q9Y5Z7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.58■■□□□ 1.69
HCFC2Q9Y5Z7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
HCFC2Q9Y5Z7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
HCFC2Q9Y5Z7 AL449106.1-201ENST00000608517 1980 ntBASIC25.58■■□□□ 1.69
HCFC2Q9Y5Z7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
HCFC2Q9Y5Z7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
HCFC2Q9Y5Z7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.57■■□□□ 1.68
HCFC2Q9Y5Z7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HCFC2Q9Y5Z7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.57■■□□□ 1.68
HCFC2Q9Y5Z7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
HCFC2Q9Y5Z7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
HCFC2Q9Y5Z7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.56■■□□□ 1.68
HCFC2Q9Y5Z7 KRT18P24-201ENST00000344739 1156 ntBASIC25.56■■□□□ 1.68
HCFC2Q9Y5Z7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.56■■□□□ 1.68
HCFC2Q9Y5Z7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC25.56■■□□□ 1.68
HCFC2Q9Y5Z7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
HCFC2Q9Y5Z7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.55■■□□□ 1.68
HCFC2Q9Y5Z7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
HCFC2Q9Y5Z7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.55■■□□□ 1.68
HCFC2Q9Y5Z7 KRT16P3-201ENST00000439127 1283 ntBASIC25.54■■□□□ 1.68
HCFC2Q9Y5Z7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.54■■□□□ 1.68
HCFC2Q9Y5Z7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
HCFC2Q9Y5Z7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
HCFC2Q9Y5Z7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms