Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC27.36■■□□□ 1.97
KDM3AQ9Y4C1 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
KDM3AQ9Y4C1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.35■■□□□ 1.97
KDM3AQ9Y4C1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC27.35■■□□□ 1.97
KDM3AQ9Y4C1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.35■■□□□ 1.97
KDM3AQ9Y4C1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
KDM3AQ9Y4C1 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
KDM3AQ9Y4C1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
KDM3AQ9Y4C1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
KDM3AQ9Y4C1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
KDM3AQ9Y4C1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
KDM3AQ9Y4C1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
KDM3AQ9Y4C1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
KDM3AQ9Y4C1 RP9P-202ENST00000450133 1212 ntBASIC27.34■■□□□ 1.97
KDM3AQ9Y4C1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
KDM3AQ9Y4C1 MIR3960-201ENST00000583311 91 ntBASIC27.34■■□□□ 1.97
KDM3AQ9Y4C1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
KDM3AQ9Y4C1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC27.34■■□□□ 1.97
KDM3AQ9Y4C1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
KDM3AQ9Y4C1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
KDM3AQ9Y4C1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
KDM3AQ9Y4C1 HES4-204ENST00000484667 667 ntTSL 3 BASIC27.33■■□□□ 1.97
KDM3AQ9Y4C1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
KDM3AQ9Y4C1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
KDM3AQ9Y4C1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.32■■□□□ 1.96
KDM3AQ9Y4C1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
KDM3AQ9Y4C1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
KDM3AQ9Y4C1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.32■■□□□ 1.96
KDM3AQ9Y4C1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC27.32■■□□□ 1.96
KDM3AQ9Y4C1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC27.32■■□□□ 1.96
KDM3AQ9Y4C1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
KDM3AQ9Y4C1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
KDM3AQ9Y4C1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
KDM3AQ9Y4C1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC27.31■■□□□ 1.96
KDM3AQ9Y4C1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.31■■□□□ 1.96
KDM3AQ9Y4C1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
KDM3AQ9Y4C1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
KDM3AQ9Y4C1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
KDM3AQ9Y4C1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
KDM3AQ9Y4C1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
KDM3AQ9Y4C1 RAP2CP1-202ENST00000605179 643 ntBASIC27.29■■□□□ 1.96
KDM3AQ9Y4C1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC27.29■■□□□ 1.96
KDM3AQ9Y4C1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
KDM3AQ9Y4C1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
KDM3AQ9Y4C1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
KDM3AQ9Y4C1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.28■■□□□ 1.96
KDM3AQ9Y4C1 AC093536.1-201ENST00000569153 554 ntBASIC27.28■■□□□ 1.96
KDM3AQ9Y4C1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27.28■■□□□ 1.96
KDM3AQ9Y4C1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
KDM3AQ9Y4C1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
KDM3AQ9Y4C1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.28■■□□□ 1.96
KDM3AQ9Y4C1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.28■■□□□ 1.96
KDM3AQ9Y4C1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
KDM3AQ9Y4C1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
KDM3AQ9Y4C1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
KDM3AQ9Y4C1 AC092803.2-201ENST00000564287 1899 ntBASIC27.27■■□□□ 1.96
KDM3AQ9Y4C1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
KDM3AQ9Y4C1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.26■■□□□ 1.96
KDM3AQ9Y4C1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.26■■□□□ 1.95
KDM3AQ9Y4C1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
KDM3AQ9Y4C1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
KDM3AQ9Y4C1 AC091060.1-201ENST00000623524 1766 ntBASIC27.26■■□□□ 1.95
KDM3AQ9Y4C1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
KDM3AQ9Y4C1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.26■■□□□ 1.95
KDM3AQ9Y4C1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
KDM3AQ9Y4C1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC27.26■■□□□ 1.95
KDM3AQ9Y4C1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC27.25■■□□□ 1.95
KDM3AQ9Y4C1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
KDM3AQ9Y4C1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
KDM3AQ9Y4C1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC27.24■■□□□ 1.95
KDM3AQ9Y4C1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC27.24■■□□□ 1.95
KDM3AQ9Y4C1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC27.24■■□□□ 1.95
KDM3AQ9Y4C1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
KDM3AQ9Y4C1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
KDM3AQ9Y4C1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
KDM3AQ9Y4C1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
KDM3AQ9Y4C1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
KDM3AQ9Y4C1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
KDM3AQ9Y4C1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
KDM3AQ9Y4C1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
KDM3AQ9Y4C1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
KDM3AQ9Y4C1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
KDM3AQ9Y4C1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
KDM3AQ9Y4C1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
KDM3AQ9Y4C1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
KDM3AQ9Y4C1 AC145676.1-201ENST00000514988 2004 ntBASIC27.2■■□□□ 1.95
KDM3AQ9Y4C1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
KDM3AQ9Y4C1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
KDM3AQ9Y4C1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.2■■□□□ 1.95
KDM3AQ9Y4C1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC27.2■■□□□ 1.95
KDM3AQ9Y4C1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC27.2■■□□□ 1.95
KDM3AQ9Y4C1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
KDM3AQ9Y4C1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
KDM3AQ9Y4C1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC27.19■■□□□ 1.94
KDM3AQ9Y4C1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC27.19■■□□□ 1.94
KDM3AQ9Y4C1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
KDM3AQ9Y4C1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC27.19■■□□□ 1.94
KDM3AQ9Y4C1 DUX4L18-201ENST00000553347 1267 ntBASIC27.18■■□□□ 1.94
KDM3AQ9Y4C1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
KDM3AQ9Y4C1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC27.18■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms