Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGB4Q9UN71 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGB4Q9UN71 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHGB4Q9UN71 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHGB4Q9UN71 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.21■■□□□ 1.31
PCDHGB4Q9UN71 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGB4Q9UN71 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHGB4Q9UN71 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGB4Q9UN71 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGB4Q9UN71 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHGB4Q9UN71 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.21■■□□□ 1.31
PCDHGB4Q9UN71 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHGB4Q9UN71 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
PCDHGB4Q9UN71 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
PCDHGB4Q9UN71 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGB4Q9UN71 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGB4Q9UN71 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.2■■□□□ 1.3
PCDHGB4Q9UN71 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGB4Q9UN71 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGB4Q9UN71 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
PCDHGB4Q9UN71 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGB4Q9UN71 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGB4Q9UN71 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.19■■□□□ 1.3
PCDHGB4Q9UN71 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHGB4Q9UN71 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGB4Q9UN71 ERN1-208ENST00000606895 2068 ntBASIC23.19■■□□□ 1.3
PCDHGB4Q9UN71 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGB4Q9UN71 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
PCDHGB4Q9UN71 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGB4Q9UN71 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGB4Q9UN71 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGB4Q9UN71 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGB4Q9UN71 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGB4Q9UN71 ZNRF2P2-203ENST00000454624 420 ntBASIC23.18■■□□□ 1.3
PCDHGB4Q9UN71 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.18■■□□□ 1.3
PCDHGB4Q9UN71 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGB4Q9UN71 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PCDHGB4Q9UN71 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGB4Q9UN71 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGB4Q9UN71 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGB4Q9UN71 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
PCDHGB4Q9UN71 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGB4Q9UN71 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PCDHGB4Q9UN71 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGB4Q9UN71 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGB4Q9UN71 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGB4Q9UN71 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHGB4Q9UN71 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PCDHGB4Q9UN71 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGB4Q9UN71 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGB4Q9UN71 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGB4Q9UN71 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGB4Q9UN71 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGB4Q9UN71 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PCDHGB4Q9UN71 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHGB4Q9UN71 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHGB4Q9UN71 AC148477.6-201ENST00000623746 465 ntBASIC23.16■■□□□ 1.3
PCDHGB4Q9UN71 MIR219A2-201ENST00000608502 1504 ntBASIC23.16■■□□□ 1.3
PCDHGB4Q9UN71 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGB4Q9UN71 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.16■■□□□ 1.3
PCDHGB4Q9UN71 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.16■■□□□ 1.3
PCDHGB4Q9UN71 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGB4Q9UN71 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGB4Q9UN71 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGB4Q9UN71 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGB4Q9UN71 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHGB4Q9UN71 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGB4Q9UN71 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGB4Q9UN71 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGB4Q9UN71 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGB4Q9UN71 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGB4Q9UN71 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
PCDHGB4Q9UN71 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHGB4Q9UN71 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHGB4Q9UN71 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHGB4Q9UN71 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.14■■□□□ 1.3
PCDHGB4Q9UN71 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHGB4Q9UN71 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGB4Q9UN71 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGB4Q9UN71 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.14■■□□□ 1.29
PCDHGB4Q9UN71 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.14■■□□□ 1.29
PCDHGB4Q9UN71 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGB4Q9UN71 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
PCDHGB4Q9UN71 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGB4Q9UN71 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGB4Q9UN71 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGB4Q9UN71 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGB4Q9UN71 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
PCDHGB4Q9UN71 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PCDHGB4Q9UN71 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGB4Q9UN71 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGB4Q9UN71 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGB4Q9UN71 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGB4Q9UN71 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGB4Q9UN71 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.12■■□□□ 1.29
PCDHGB4Q9UN71 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHGB4Q9UN71 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGB4Q9UN71 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGB4Q9UN71 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGB4Q9UN71 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms