Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 AC022616.5-201ENST00000518796 181 ntBASIC31.44■■■□□ 2.62
CCNL1Q9UK58 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC31.44■■■□□ 2.62
CCNL1Q9UK58 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC31.44■■■□□ 2.62
CCNL1Q9UK58 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CCNL1Q9UK58 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CCNL1Q9UK58 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC31.43■■■□□ 2.62
CCNL1Q9UK58 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCNL1Q9UK58 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCNL1Q9UK58 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CCNL1Q9UK58 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCNL1Q9UK58 AL139246.5-201ENST00000606645 996 ntBASIC31.42■■■□□ 2.62
CCNL1Q9UK58 TSPY9P-201ENST00000440215 945 ntBASIC31.41■■■□□ 2.62
CCNL1Q9UK58 TSPY11P-201ENST00000442607 1045 ntBASIC31.41■■■□□ 2.62
CCNL1Q9UK58 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC31.41■■■□□ 2.62
CCNL1Q9UK58 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC31.41■■■□□ 2.62
CCNL1Q9UK58 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC31.41■■■□□ 2.62
CCNL1Q9UK58 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCNL1Q9UK58 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.41■■■□□ 2.62
CCNL1Q9UK58 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCNL1Q9UK58 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.4■■■□□ 2.62
CCNL1Q9UK58 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CCNL1Q9UK58 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CCNL1Q9UK58 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
CCNL1Q9UK58 RALB-208ENST00000631312 311 ntTSL 5 BASIC31.4■■■□□ 2.62
CCNL1Q9UK58 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CCNL1Q9UK58 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCNL1Q9UK58 KRT18P24-201ENST00000344739 1156 ntBASIC31.39■■■□□ 2.62
CCNL1Q9UK58 NALT1-201ENST00000429224 738 ntTSL 5 BASIC31.38■■■□□ 2.61
CCNL1Q9UK58 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC31.38■■■□□ 2.61
CCNL1Q9UK58 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CCNL1Q9UK58 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CCNL1Q9UK58 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC31.37■■■□□ 2.61
CCNL1Q9UK58 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
CCNL1Q9UK58 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC31.36■■■□□ 2.61
CCNL1Q9UK58 TRIR-202ENST00000588213 841 ntTSL 3 BASIC31.36■■■□□ 2.61
CCNL1Q9UK58 AC137630.3-201ENST00000607245 391 ntBASIC31.36■■■□□ 2.61
CCNL1Q9UK58 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.35■■■□□ 2.61
CCNL1Q9UK58 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
CCNL1Q9UK58 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
CCNL1Q9UK58 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCNL1Q9UK58 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CCNL1Q9UK58 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCNL1Q9UK58 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCNL1Q9UK58 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC31.35■■■□□ 2.61
CCNL1Q9UK58 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC31.35■■■□□ 2.61
CCNL1Q9UK58 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CCNL1Q9UK58 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
CCNL1Q9UK58 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CCNL1Q9UK58 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CCNL1Q9UK58 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CCNL1Q9UK58 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CCNL1Q9UK58 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.33■■■□□ 2.61
CCNL1Q9UK58 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC31.33■■■□□ 2.61
CCNL1Q9UK58 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC31.33■■■□□ 2.61
CCNL1Q9UK58 AC131281.2-201ENST00000520478 145 ntBASIC31.33■■■□□ 2.61
CCNL1Q9UK58 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.33■■■□□ 2.61
CCNL1Q9UK58 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CCNL1Q9UK58 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CCNL1Q9UK58 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.33■■■□□ 2.61
CCNL1Q9UK58 AC021242.3-201ENST00000607598 1377 ntBASIC31.32■■■□□ 2.6
CCNL1Q9UK58 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC31.32■■■□□ 2.6
CCNL1Q9UK58 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC31.32■■■□□ 2.6
CCNL1Q9UK58 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC31.32■■■□□ 2.6
CCNL1Q9UK58 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.32■■■□□ 2.6
CCNL1Q9UK58 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC31.32■■■□□ 2.6
CCNL1Q9UK58 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCNL1Q9UK58 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC31.31■■■□□ 2.6
CCNL1Q9UK58 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CCNL1Q9UK58 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
CCNL1Q9UK58 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC31.3■■■□□ 2.6
CCNL1Q9UK58 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCNL1Q9UK58 KRT18P10-201ENST00000388836 1287 ntBASIC31.28■■■□□ 2.6
CCNL1Q9UK58 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC31.28■■■□□ 2.6
CCNL1Q9UK58 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC31.28■■■□□ 2.6
CCNL1Q9UK58 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CCNL1Q9UK58 RPP21-222ENST00000433076 577 ntTSL 2 BASIC31.27■■■□□ 2.6
CCNL1Q9UK58 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC31.27■■■□□ 2.6
CCNL1Q9UK58 SRR-208ENST00000576848 588 ntTSL 4 BASIC31.27■■■□□ 2.6
CCNL1Q9UK58 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CCNL1Q9UK58 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.27■■■□□ 2.6
CCNL1Q9UK58 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCNL1Q9UK58 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
CCNL1Q9UK58 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CCNL1Q9UK58 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC31.26■■■□□ 2.59
CCNL1Q9UK58 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CCNL1Q9UK58 AC120024.1-201ENST00000562672 995 ntBASIC31.26■■■□□ 2.59
CCNL1Q9UK58 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC31.25■■■□□ 2.59
CCNL1Q9UK58 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC31.25■■■□□ 2.59
CCNL1Q9UK58 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CCNL1Q9UK58 AL136116.3-201ENST00000402907 1138 ntBASIC31.24■■■□□ 2.59
CCNL1Q9UK58 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC31.24■■■□□ 2.59
CCNL1Q9UK58 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCNL1Q9UK58 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC31.24■■■□□ 2.59
CCNL1Q9UK58 AC092028.1-203ENST00000608262 953 ntBASIC31.24■■■□□ 2.59
CCNL1Q9UK58 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
CCNL1Q9UK58 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCNL1Q9UK58 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC31.23■■■□□ 2.59
CCNL1Q9UK58 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCNL1Q9UK58 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
CCNL1Q9UK58 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms