Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.96■□□□□ 0.79
LIN7CQ9NUP9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.96■□□□□ 0.79
LIN7CQ9NUP9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
LIN7CQ9NUP9 MIR219A2-201ENST00000608502 1504 ntBASIC19.96■□□□□ 0.79
LIN7CQ9NUP9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIN7CQ9NUP9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
LIN7CQ9NUP9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIN7CQ9NUP9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.95■□□□□ 0.78
LIN7CQ9NUP9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.95■□□□□ 0.78
LIN7CQ9NUP9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LIN7CQ9NUP9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LIN7CQ9NUP9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LIN7CQ9NUP9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LIN7CQ9NUP9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LIN7CQ9NUP9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIN7CQ9NUP9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIN7CQ9NUP9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIN7CQ9NUP9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LIN7CQ9NUP9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LIN7CQ9NUP9 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.94■□□□□ 0.78
LIN7CQ9NUP9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LIN7CQ9NUP9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LIN7CQ9NUP9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LIN7CQ9NUP9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LIN7CQ9NUP9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LIN7CQ9NUP9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LIN7CQ9NUP9 AC093323.1-202ENST00000635031 2045 ntBASIC19.93■□□□□ 0.78
LIN7CQ9NUP9 ERN1-208ENST00000606895 2068 ntBASIC19.93■□□□□ 0.78
LIN7CQ9NUP9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LIN7CQ9NUP9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LIN7CQ9NUP9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
LIN7CQ9NUP9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LIN7CQ9NUP9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.93■□□□□ 0.78
LIN7CQ9NUP9 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LIN7CQ9NUP9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LIN7CQ9NUP9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LIN7CQ9NUP9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LIN7CQ9NUP9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.92■□□□□ 0.78
LIN7CQ9NUP9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LIN7CQ9NUP9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LIN7CQ9NUP9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.92■□□□□ 0.78
LIN7CQ9NUP9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
LIN7CQ9NUP9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.92■□□□□ 0.78
LIN7CQ9NUP9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.92■□□□□ 0.78
LIN7CQ9NUP9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LIN7CQ9NUP9 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.92■□□□□ 0.78
LIN7CQ9NUP9 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LIN7CQ9NUP9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
LIN7CQ9NUP9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.9■□□□□ 0.78
LIN7CQ9NUP9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LIN7CQ9NUP9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LIN7CQ9NUP9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LIN7CQ9NUP9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.9■□□□□ 0.78
LIN7CQ9NUP9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
LIN7CQ9NUP9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
LIN7CQ9NUP9 AC142381.3-201ENST00000568208 1670 ntBASIC19.9■□□□□ 0.78
LIN7CQ9NUP9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
LIN7CQ9NUP9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
LIN7CQ9NUP9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LIN7CQ9NUP9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
LIN7CQ9NUP9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LIN7CQ9NUP9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LIN7CQ9NUP9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.89■□□□□ 0.77
LIN7CQ9NUP9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LIN7CQ9NUP9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
LIN7CQ9NUP9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LIN7CQ9NUP9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
LIN7CQ9NUP9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LIN7CQ9NUP9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LIN7CQ9NUP9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.89■□□□□ 0.77
LIN7CQ9NUP9 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
LIN7CQ9NUP9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
LIN7CQ9NUP9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.89■□□□□ 0.77
LIN7CQ9NUP9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.89■□□□□ 0.77
LIN7CQ9NUP9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
LIN7CQ9NUP9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LIN7CQ9NUP9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LIN7CQ9NUP9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.88■□□□□ 0.77
LIN7CQ9NUP9 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
LIN7CQ9NUP9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIN7CQ9NUP9 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LIN7CQ9NUP9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LIN7CQ9NUP9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.87■□□□□ 0.77
LIN7CQ9NUP9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIN7CQ9NUP9 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIN7CQ9NUP9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.87■□□□□ 0.77
LIN7CQ9NUP9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LIN7CQ9NUP9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LIN7CQ9NUP9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.86■□□□□ 0.77
LIN7CQ9NUP9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LIN7CQ9NUP9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
LIN7CQ9NUP9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.86■□□□□ 0.77
LIN7CQ9NUP9 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
LIN7CQ9NUP9 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
LIN7CQ9NUP9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
LIN7CQ9NUP9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LIN7CQ9NUP9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LIN7CQ9NUP9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LIN7CQ9NUP9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
LIN7CQ9NUP9 AC126177.7-201ENST00000547904 679 ntBASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms