Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CDC42SE1Q9NRR8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE1Q9NRR8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE1Q9NRR8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE1Q9NRR8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE1Q9NRR8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE1Q9NRR8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC12.63□□□□□ -0.39
CDC42SE1Q9NRR8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC12.63□□□□□ -0.39
CDC42SE1Q9NRR8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CDC42SE1Q9NRR8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CDC42SE1Q9NRR8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CDC42SE1Q9NRR8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CDC42SE1Q9NRR8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE1Q9NRR8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE1Q9NRR8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
CDC42SE1Q9NRR8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE1Q9NRR8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE1Q9NRR8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC12.62□□□□□ -0.39
CDC42SE1Q9NRR8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE1Q9NRR8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE1Q9NRR8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CDC42SE1Q9NRR8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC12.62□□□□□ -0.39
CDC42SE1Q9NRR8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE1Q9NRR8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CDC42SE1Q9NRR8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE1Q9NRR8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CDC42SE1Q9NRR8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE1Q9NRR8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CDC42SE1Q9NRR8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CDC42SE1Q9NRR8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CDC42SE1Q9NRR8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CDC42SE1Q9NRR8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC12.6□□□□□ -0.39
CDC42SE1Q9NRR8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
CDC42SE1Q9NRR8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC12.6□□□□□ -0.39
CDC42SE1Q9NRR8 AC092667.1-201ENST00000434301 2586 ntBASIC12.6□□□□□ -0.39
CDC42SE1Q9NRR8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CDC42SE1Q9NRR8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC12.6□□□□□ -0.39
CDC42SE1Q9NRR8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CDC42SE1Q9NRR8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC12.6□□□□□ -0.39
CDC42SE1Q9NRR8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC42SE1Q9NRR8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CDC42SE1Q9NRR8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CDC42SE1Q9NRR8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC42SE1Q9NRR8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CDC42SE1Q9NRR8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CDC42SE1Q9NRR8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE1Q9NRR8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE1Q9NRR8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE1Q9NRR8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE1Q9NRR8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE1Q9NRR8 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE1Q9NRR8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE1Q9NRR8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CDC42SE1Q9NRR8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC12.59□□□□□ -0.39
CDC42SE1Q9NRR8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC12.58□□□□□ -0.39
CDC42SE1Q9NRR8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC12.58□□□□□ -0.39
CDC42SE1Q9NRR8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CDC42SE1Q9NRR8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CDC42SE1Q9NRR8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE1Q9NRR8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE1Q9NRR8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE1Q9NRR8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE1Q9NRR8 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE1Q9NRR8 LINC00565-201ENST00000562710 2331 ntBASIC12.58□□□□□ -0.4
CDC42SE1Q9NRR8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE1Q9NRR8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
CDC42SE1Q9NRR8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE1Q9NRR8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CDC42SE1Q9NRR8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE1Q9NRR8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE1Q9NRR8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CDC42SE1Q9NRR8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE1Q9NRR8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE1Q9NRR8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE1Q9NRR8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE1Q9NRR8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE1Q9NRR8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CDC42SE1Q9NRR8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE1Q9NRR8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE1Q9NRR8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC12.57□□□□□ -0.4
CDC42SE1Q9NRR8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CDC42SE1Q9NRR8 AL117328.2-201ENST00000624617 1940 ntBASIC12.56□□□□□ -0.4
CDC42SE1Q9NRR8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDC42SE1Q9NRR8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDC42SE1Q9NRR8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC12.56□□□□□ -0.4
CDC42SE1Q9NRR8 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDC42SE1Q9NRR8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CDC42SE1Q9NRR8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE1Q9NRR8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE1Q9NRR8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC12.55□□□□□ -0.4
CDC42SE1Q9NRR8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC12.55□□□□□ -0.4
CDC42SE1Q9NRR8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CDC42SE1Q9NRR8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
CDC42SE1Q9NRR8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE1Q9NRR8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE1Q9NRR8 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE1Q9NRR8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CDC42SE1Q9NRR8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE1Q9NRR8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE1Q9NRR8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms