Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMCO4Q9NRQ5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SMCO4Q9NRQ5 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMCO4Q9NRQ5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMCO4Q9NRQ5 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMCO4Q9NRQ5 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMCO4Q9NRQ5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMCO4Q9NRQ5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SMCO4Q9NRQ5 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.05■□□□□ 0.64
SMCO4Q9NRQ5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.05■□□□□ 0.64
SMCO4Q9NRQ5 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SMCO4Q9NRQ5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMCO4Q9NRQ5 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMCO4Q9NRQ5 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.04■□□□□ 0.64
SMCO4Q9NRQ5 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC19.04■□□□□ 0.64
SMCO4Q9NRQ5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMCO4Q9NRQ5 AP002414.2-202ENST00000590929 1450 ntBASIC19.03■□□□□ 0.64
SMCO4Q9NRQ5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMCO4Q9NRQ5 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMCO4Q9NRQ5 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMCO4Q9NRQ5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMCO4Q9NRQ5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
SMCO4Q9NRQ5 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMCO4Q9NRQ5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SMCO4Q9NRQ5 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMCO4Q9NRQ5 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.02■□□□□ 0.64
SMCO4Q9NRQ5 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SMCO4Q9NRQ5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.02■□□□□ 0.64
SMCO4Q9NRQ5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
SMCO4Q9NRQ5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
SMCO4Q9NRQ5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SMCO4Q9NRQ5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SMCO4Q9NRQ5 AL117328.2-201ENST00000624617 1940 ntBASIC19.02■□□□□ 0.63
SMCO4Q9NRQ5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.01■□□□□ 0.63
SMCO4Q9NRQ5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.01■□□□□ 0.63
SMCO4Q9NRQ5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMCO4Q9NRQ5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.01■□□□□ 0.63
SMCO4Q9NRQ5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SMCO4Q9NRQ5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SMCO4Q9NRQ5 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMCO4Q9NRQ5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SMCO4Q9NRQ5 INO80B-203ENST00000409917 796 ntTSL 2 BASIC19■□□□□ 0.63
SMCO4Q9NRQ5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMCO4Q9NRQ5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMCO4Q9NRQ5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMCO4Q9NRQ5 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SMCO4Q9NRQ5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SMCO4Q9NRQ5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMCO4Q9NRQ5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SMCO4Q9NRQ5 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SMCO4Q9NRQ5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMCO4Q9NRQ5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SMCO4Q9NRQ5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMCO4Q9NRQ5 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMCO4Q9NRQ5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.98■□□□□ 0.63
SMCO4Q9NRQ5 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMCO4Q9NRQ5 AC015813.7-201ENST00000623294 581 ntBASIC18.98■□□□□ 0.63
SMCO4Q9NRQ5 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMCO4Q9NRQ5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SMCO4Q9NRQ5 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMCO4Q9NRQ5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.98■□□□□ 0.63
SMCO4Q9NRQ5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMCO4Q9NRQ5 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SMCO4Q9NRQ5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.98■□□□□ 0.63
SMCO4Q9NRQ5 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SMCO4Q9NRQ5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SMCO4Q9NRQ5 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMCO4Q9NRQ5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMCO4Q9NRQ5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.97■□□□□ 0.63
SMCO4Q9NRQ5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.97■□□□□ 0.63
SMCO4Q9NRQ5 AC100797.4-201ENST00000631653 1827 ntBASIC18.97■□□□□ 0.63
SMCO4Q9NRQ5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMCO4Q9NRQ5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.97■□□□□ 0.63
SMCO4Q9NRQ5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMCO4Q9NRQ5 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMCO4Q9NRQ5 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMCO4Q9NRQ5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.96■□□□□ 0.63
SMCO4Q9NRQ5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.96■□□□□ 0.63
SMCO4Q9NRQ5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.96■□□□□ 0.63
SMCO4Q9NRQ5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.96■□□□□ 0.63
SMCO4Q9NRQ5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMCO4Q9NRQ5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMCO4Q9NRQ5 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMCO4Q9NRQ5 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMCO4Q9NRQ5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.95■□□□□ 0.62
SMCO4Q9NRQ5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SMCO4Q9NRQ5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMCO4Q9NRQ5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMCO4Q9NRQ5 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMCO4Q9NRQ5 LINC01124-201ENST00000409786 2117 ntBASIC18.95■□□□□ 0.62
SMCO4Q9NRQ5 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SMCO4Q9NRQ5 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMCO4Q9NRQ5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMCO4Q9NRQ5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SMCO4Q9NRQ5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMCO4Q9NRQ5 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMCO4Q9NRQ5 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMCO4Q9NRQ5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.94■□□□□ 0.62
SMCO4Q9NRQ5 LINC00565-201ENST00000562710 2331 ntBASIC18.94■□□□□ 0.62
SMCO4Q9NRQ5 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms