Protein–RNA interactions for Protein: Q9HD33

MRPL47, 39S ribosomal protein L47, mitochondrial, humanhuman

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL47Q9HD33 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
MRPL47Q9HD33 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.51■■□□□ 1.67
MRPL47Q9HD33 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
MRPL47Q9HD33 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
MRPL47Q9HD33 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
MRPL47Q9HD33 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.5■■□□□ 1.67
MRPL47Q9HD33 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.5■■□□□ 1.67
MRPL47Q9HD33 AL157400.5-201ENST00000507624 621 ntBASIC25.5■■□□□ 1.67
MRPL47Q9HD33 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
MRPL47Q9HD33 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.49■■□□□ 1.67
MRPL47Q9HD33 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
MRPL47Q9HD33 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
MRPL47Q9HD33 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.49■■□□□ 1.67
MRPL47Q9HD33 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
MRPL47Q9HD33 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
MRPL47Q9HD33 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.48■■□□□ 1.67
MRPL47Q9HD33 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
MRPL47Q9HD33 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
MRPL47Q9HD33 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.47■■□□□ 1.67
MRPL47Q9HD33 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.47■■□□□ 1.67
MRPL47Q9HD33 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
MRPL47Q9HD33 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
MRPL47Q9HD33 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
MRPL47Q9HD33 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
MRPL47Q9HD33 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.46■■□□□ 1.67
MRPL47Q9HD33 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MRPL47Q9HD33 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.46■■□□□ 1.67
MRPL47Q9HD33 AC025884.2-201ENST00000553429 711 ntBASIC25.46■■□□□ 1.67
MRPL47Q9HD33 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
MRPL47Q9HD33 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.46■■□□□ 1.67
MRPL47Q9HD33 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.46■■□□□ 1.67
MRPL47Q9HD33 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
MRPL47Q9HD33 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
MRPL47Q9HD33 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
MRPL47Q9HD33 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
MRPL47Q9HD33 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.45■■□□□ 1.66
MRPL47Q9HD33 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
MRPL47Q9HD33 AC096887.2-201ENST00000623443 1957 ntBASIC25.45■■□□□ 1.66
MRPL47Q9HD33 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
MRPL47Q9HD33 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
MRPL47Q9HD33 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
MRPL47Q9HD33 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
MRPL47Q9HD33 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
MRPL47Q9HD33 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.44■■□□□ 1.66
MRPL47Q9HD33 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
MRPL47Q9HD33 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
MRPL47Q9HD33 AC092296.2-201ENST00000589470 999 ntBASIC25.43■■□□□ 1.66
MRPL47Q9HD33 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC25.43■■□□□ 1.66
MRPL47Q9HD33 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.43■■□□□ 1.66
MRPL47Q9HD33 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
MRPL47Q9HD33 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
MRPL47Q9HD33 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.42■■□□□ 1.66
MRPL47Q9HD33 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC25.42■■□□□ 1.66
MRPL47Q9HD33 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.42■■□□□ 1.66
MRPL47Q9HD33 MIR3960-201ENST00000583311 91 ntBASIC25.42■■□□□ 1.66
MRPL47Q9HD33 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
MRPL47Q9HD33 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
MRPL47Q9HD33 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
MRPL47Q9HD33 SMPD5-203ENST00000639008 1464 ntBASIC25.41■■□□□ 1.66
MRPL47Q9HD33 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
MRPL47Q9HD33 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.41■■□□□ 1.66
MRPL47Q9HD33 AC022413.1-201ENST00000624602 984 ntBASIC25.41■■□□□ 1.66
MRPL47Q9HD33 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
MRPL47Q9HD33 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
MRPL47Q9HD33 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
MRPL47Q9HD33 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.4■■□□□ 1.66
MRPL47Q9HD33 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
MRPL47Q9HD33 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
MRPL47Q9HD33 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
MRPL47Q9HD33 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
MRPL47Q9HD33 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
MRPL47Q9HD33 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
MRPL47Q9HD33 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
MRPL47Q9HD33 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.39■■□□□ 1.66
MRPL47Q9HD33 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
MRPL47Q9HD33 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
MRPL47Q9HD33 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.39■■□□□ 1.65
MRPL47Q9HD33 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.38■■□□□ 1.65
MRPL47Q9HD33 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.38■■□□□ 1.65
MRPL47Q9HD33 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
MRPL47Q9HD33 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
MRPL47Q9HD33 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
MRPL47Q9HD33 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.38■■□□□ 1.65
MRPL47Q9HD33 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
MRPL47Q9HD33 ECEL1P2-201ENST00000461596 1295 ntBASIC25.38■■□□□ 1.65
MRPL47Q9HD33 MIR4449-201ENST00000578365 66 ntBASIC25.38■■□□□ 1.65
MRPL47Q9HD33 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
MRPL47Q9HD33 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
MRPL47Q9HD33 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
MRPL47Q9HD33 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
MRPL47Q9HD33 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.37■■□□□ 1.65
MRPL47Q9HD33 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
MRPL47Q9HD33 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.37■■□□□ 1.65
MRPL47Q9HD33 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
MRPL47Q9HD33 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
MRPL47Q9HD33 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.36■■□□□ 1.65
MRPL47Q9HD33 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.36■■□□□ 1.65
MRPL47Q9HD33 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.35■■□□□ 1.65
MRPL47Q9HD33 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
MRPL47Q9HD33 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms