Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GSX1Q9H4S2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.48■□□□□ 0.87
GSX1Q9H4S2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GSX1Q9H4S2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GSX1Q9H4S2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.48■□□□□ 0.87
GSX1Q9H4S2 KRT16P3-201ENST00000439127 1283 ntBASIC20.48■□□□□ 0.87
GSX1Q9H4S2 KRT125P-201ENST00000546827 989 ntBASIC20.48■□□□□ 0.87
GSX1Q9H4S2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
GSX1Q9H4S2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.48■□□□□ 0.87
GSX1Q9H4S2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
GSX1Q9H4S2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
GSX1Q9H4S2 LONRF2P2-201ENST00000439212 571 ntBASIC20.47■□□□□ 0.87
GSX1Q9H4S2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.47■□□□□ 0.87
GSX1Q9H4S2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
GSX1Q9H4S2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
GSX1Q9H4S2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
GSX1Q9H4S2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.46■□□□□ 0.87
GSX1Q9H4S2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GSX1Q9H4S2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GSX1Q9H4S2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
GSX1Q9H4S2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GSX1Q9H4S2 AL139393.2-201ENST00000608721 2025 ntBASIC20.45■□□□□ 0.86
GSX1Q9H4S2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
GSX1Q9H4S2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.45■□□□□ 0.86
GSX1Q9H4S2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GSX1Q9H4S2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
GSX1Q9H4S2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
GSX1Q9H4S2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
GSX1Q9H4S2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GSX1Q9H4S2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.44■□□□□ 0.86
GSX1Q9H4S2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GSX1Q9H4S2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
GSX1Q9H4S2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GSX1Q9H4S2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
GSX1Q9H4S2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.44■□□□□ 0.86
GSX1Q9H4S2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.44■□□□□ 0.86
GSX1Q9H4S2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GSX1Q9H4S2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GSX1Q9H4S2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GSX1Q9H4S2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
GSX1Q9H4S2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GSX1Q9H4S2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.44■□□□□ 0.86
GSX1Q9H4S2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GSX1Q9H4S2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GSX1Q9H4S2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
GSX1Q9H4S2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
GSX1Q9H4S2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
GSX1Q9H4S2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
GSX1Q9H4S2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GSX1Q9H4S2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.42■□□□□ 0.86
GSX1Q9H4S2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GSX1Q9H4S2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GSX1Q9H4S2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
GSX1Q9H4S2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GSX1Q9H4S2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.41■□□□□ 0.86
GSX1Q9H4S2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GSX1Q9H4S2 AC019171.1-201ENST00000601251 1056 ntBASIC20.41■□□□□ 0.86
GSX1Q9H4S2 AC005837.3-201ENST00000612163 286 ntBASIC20.41■□□□□ 0.86
GSX1Q9H4S2 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
GSX1Q9H4S2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GSX1Q9H4S2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GSX1Q9H4S2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GSX1Q9H4S2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GSX1Q9H4S2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
GSX1Q9H4S2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.4■□□□□ 0.86
GSX1Q9H4S2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GSX1Q9H4S2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
GSX1Q9H4S2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
GSX1Q9H4S2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GSX1Q9H4S2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.39■□□□□ 0.85
GSX1Q9H4S2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.39■□□□□ 0.85
GSX1Q9H4S2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.39■□□□□ 0.85
GSX1Q9H4S2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
GSX1Q9H4S2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.39■□□□□ 0.85
GSX1Q9H4S2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GSX1Q9H4S2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
GSX1Q9H4S2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
GSX1Q9H4S2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.38■□□□□ 0.85
GSX1Q9H4S2 BX664725.1-201ENST00000438252 379 ntBASIC20.38■□□□□ 0.85
GSX1Q9H4S2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.38■□□□□ 0.85
GSX1Q9H4S2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.38■□□□□ 0.85
GSX1Q9H4S2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GSX1Q9H4S2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GSX1Q9H4S2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GSX1Q9H4S2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
GSX1Q9H4S2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
GSX1Q9H4S2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
GSX1Q9H4S2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GSX1Q9H4S2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GSX1Q9H4S2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
GSX1Q9H4S2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
GSX1Q9H4S2 TSPY9P-201ENST00000440215 945 ntBASIC20.37■□□□□ 0.85
GSX1Q9H4S2 TSPY11P-201ENST00000442607 1045 ntBASIC20.37■□□□□ 0.85
GSX1Q9H4S2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.37■□□□□ 0.85
GSX1Q9H4S2 AC131281.2-201ENST00000520478 145 ntBASIC20.37■□□□□ 0.85
GSX1Q9H4S2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
GSX1Q9H4S2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.37■□□□□ 0.85
GSX1Q9H4S2 AC110285.6-201ENST00000617652 491 ntBASIC20.37■□□□□ 0.85
GSX1Q9H4S2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GSX1Q9H4S2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms