Protein–RNA interactions for Protein: Q9H3R1

NDST4, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST4Q9H3R1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
NDST4Q9H3R1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.81
NDST4Q9H3R1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NDST4Q9H3R1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
NDST4Q9H3R1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
NDST4Q9H3R1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.38■■□□□ 1.81
NDST4Q9H3R1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NDST4Q9H3R1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
NDST4Q9H3R1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NDST4Q9H3R1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
NDST4Q9H3R1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
NDST4Q9H3R1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NDST4Q9H3R1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
NDST4Q9H3R1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.37■■□□□ 1.81
NDST4Q9H3R1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
NDST4Q9H3R1 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
NDST4Q9H3R1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.36■■□□□ 1.81
NDST4Q9H3R1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NDST4Q9H3R1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NDST4Q9H3R1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
NDST4Q9H3R1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.35■■□□□ 1.81
NDST4Q9H3R1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
NDST4Q9H3R1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.35■■□□□ 1.81
NDST4Q9H3R1 MIR7108-201ENST00000614319 87 ntBASIC26.35■■□□□ 1.81
NDST4Q9H3R1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.34■■□□□ 1.81
NDST4Q9H3R1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
NDST4Q9H3R1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NDST4Q9H3R1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
NDST4Q9H3R1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
NDST4Q9H3R1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NDST4Q9H3R1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.33■■□□□ 1.81
NDST4Q9H3R1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NDST4Q9H3R1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.33■■□□□ 1.81
NDST4Q9H3R1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
NDST4Q9H3R1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
NDST4Q9H3R1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
NDST4Q9H3R1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.32■■□□□ 1.8
NDST4Q9H3R1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
NDST4Q9H3R1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
NDST4Q9H3R1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
NDST4Q9H3R1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.31■■□□□ 1.8
NDST4Q9H3R1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NDST4Q9H3R1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
NDST4Q9H3R1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
NDST4Q9H3R1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NDST4Q9H3R1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
NDST4Q9H3R1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
NDST4Q9H3R1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
NDST4Q9H3R1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
NDST4Q9H3R1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
NDST4Q9H3R1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.3■■□□□ 1.8
NDST4Q9H3R1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.29■■□□□ 1.8
NDST4Q9H3R1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NDST4Q9H3R1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
NDST4Q9H3R1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.29■■□□□ 1.8
NDST4Q9H3R1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.29■■□□□ 1.8
NDST4Q9H3R1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NDST4Q9H3R1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
NDST4Q9H3R1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.28■■□□□ 1.8
NDST4Q9H3R1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NDST4Q9H3R1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.28■■□□□ 1.8
NDST4Q9H3R1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.28■■□□□ 1.8
NDST4Q9H3R1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.28■■□□□ 1.8
NDST4Q9H3R1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
NDST4Q9H3R1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
NDST4Q9H3R1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
NDST4Q9H3R1 AL157400.5-201ENST00000507624 621 ntBASIC26.27■■□□□ 1.8
NDST4Q9H3R1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NDST4Q9H3R1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NDST4Q9H3R1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.27■■□□□ 1.8
NDST4Q9H3R1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
NDST4Q9H3R1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NDST4Q9H3R1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
NDST4Q9H3R1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NDST4Q9H3R1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.26■■□□□ 1.79
NDST4Q9H3R1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
NDST4Q9H3R1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
NDST4Q9H3R1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.26■■□□□ 1.79
NDST4Q9H3R1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
NDST4Q9H3R1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NDST4Q9H3R1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NDST4Q9H3R1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NDST4Q9H3R1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
NDST4Q9H3R1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NDST4Q9H3R1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NDST4Q9H3R1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NDST4Q9H3R1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
NDST4Q9H3R1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NDST4Q9H3R1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
NDST4Q9H3R1 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
NDST4Q9H3R1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
NDST4Q9H3R1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
NDST4Q9H3R1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
NDST4Q9H3R1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
NDST4Q9H3R1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.24■■□□□ 1.79
NDST4Q9H3R1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
NDST4Q9H3R1 AC060814.1-201ENST00000554326 538 ntBASIC26.24■■□□□ 1.79
NDST4Q9H3R1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
NDST4Q9H3R1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
NDST4Q9H3R1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms