Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
UBQLN3Q9H347 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
UBQLN3Q9H347 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBQLN3Q9H347 DUSP8P4-201ENST00000399538 1761 ntBASIC22.35■■□□□ 1.17
UBQLN3Q9H347 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBQLN3Q9H347 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.35■■□□□ 1.17
UBQLN3Q9H347 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBQLN3Q9H347 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
UBQLN3Q9H347 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.35■■□□□ 1.17
UBQLN3Q9H347 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.35■■□□□ 1.17
UBQLN3Q9H347 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
UBQLN3Q9H347 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
UBQLN3Q9H347 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.35■■□□□ 1.17
UBQLN3Q9H347 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
UBQLN3Q9H347 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
UBQLN3Q9H347 AC020928.2-201ENST00000588717 2197 ntBASIC22.33■■□□□ 1.17
UBQLN3Q9H347 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.33■■□□□ 1.17
UBQLN3Q9H347 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
UBQLN3Q9H347 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.33■■□□□ 1.17
UBQLN3Q9H347 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
UBQLN3Q9H347 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.33■■□□□ 1.17
UBQLN3Q9H347 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.33■■□□□ 1.17
UBQLN3Q9H347 RP9P-202ENST00000450133 1212 ntBASIC22.33■■□□□ 1.17
UBQLN3Q9H347 MIR3960-201ENST00000583311 91 ntBASIC22.33■■□□□ 1.17
UBQLN3Q9H347 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.33■■□□□ 1.17
UBQLN3Q9H347 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
UBQLN3Q9H347 AC142472.1-201ENST00000612013 1741 ntBASIC22.33■■□□□ 1.17
UBQLN3Q9H347 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
UBQLN3Q9H347 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.33■■□□□ 1.16
UBQLN3Q9H347 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
UBQLN3Q9H347 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
UBQLN3Q9H347 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
UBQLN3Q9H347 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
UBQLN3Q9H347 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
UBQLN3Q9H347 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
UBQLN3Q9H347 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.32■■□□□ 1.16
UBQLN3Q9H347 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
UBQLN3Q9H347 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.31■■□□□ 1.16
UBQLN3Q9H347 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.31■■□□□ 1.16
UBQLN3Q9H347 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.31■■□□□ 1.16
UBQLN3Q9H347 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
UBQLN3Q9H347 AC009831.1-201ENST00000580420 1582 ntBASIC22.31■■□□□ 1.16
UBQLN3Q9H347 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
UBQLN3Q9H347 AC026202.3-201ENST00000600805 1127 ntBASIC22.31■■□□□ 1.16
UBQLN3Q9H347 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
UBQLN3Q9H347 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
UBQLN3Q9H347 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
UBQLN3Q9H347 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
UBQLN3Q9H347 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.3■■□□□ 1.16
UBQLN3Q9H347 KRT18P60-201ENST00000312876 1297 ntBASIC22.3■■□□□ 1.16
UBQLN3Q9H347 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
UBQLN3Q9H347 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
UBQLN3Q9H347 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
UBQLN3Q9H347 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
UBQLN3Q9H347 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
UBQLN3Q9H347 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
UBQLN3Q9H347 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
UBQLN3Q9H347 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
UBQLN3Q9H347 AC093536.1-201ENST00000569153 554 ntBASIC22.29■■□□□ 1.16
UBQLN3Q9H347 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
UBQLN3Q9H347 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.29■■□□□ 1.16
UBQLN3Q9H347 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.29■■□□□ 1.16
UBQLN3Q9H347 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
UBQLN3Q9H347 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
UBQLN3Q9H347 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.28■■□□□ 1.16
UBQLN3Q9H347 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
UBQLN3Q9H347 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
UBQLN3Q9H347 AC133552.2-201ENST00000619106 1032 ntBASIC22.28■■□□□ 1.16
UBQLN3Q9H347 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
UBQLN3Q9H347 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
UBQLN3Q9H347 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
UBQLN3Q9H347 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
UBQLN3Q9H347 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.27■■□□□ 1.16
UBQLN3Q9H347 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
UBQLN3Q9H347 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
UBQLN3Q9H347 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
UBQLN3Q9H347 RAP2CP1-202ENST00000605179 643 ntBASIC22.27■■□□□ 1.16
UBQLN3Q9H347 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
UBQLN3Q9H347 AC012354.3-201ENST00000623734 483 ntBASIC22.27■■□□□ 1.16
UBQLN3Q9H347 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
UBQLN3Q9H347 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
UBQLN3Q9H347 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
UBQLN3Q9H347 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
UBQLN3Q9H347 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.26■■□□□ 1.15
UBQLN3Q9H347 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
UBQLN3Q9H347 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
UBQLN3Q9H347 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
UBQLN3Q9H347 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
UBQLN3Q9H347 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
UBQLN3Q9H347 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.25■■□□□ 1.15
UBQLN3Q9H347 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.25■■□□□ 1.15
UBQLN3Q9H347 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
UBQLN3Q9H347 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.25■■□□□ 1.15
UBQLN3Q9H347 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
UBQLN3Q9H347 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
UBQLN3Q9H347 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
UBQLN3Q9H347 AL592293.1-201ENST00000502889 1188 ntBASIC22.24■■□□□ 1.15
UBQLN3Q9H347 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.24■■□□□ 1.15
UBQLN3Q9H347 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.23■■□□□ 1.15
UBQLN3Q9H347 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms