Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
RTFDC1Q9BY42 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC29.93■■■□□ 2.38
RTFDC1Q9BY42 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC29.93■■■□□ 2.38
RTFDC1Q9BY42 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC29.93■■■□□ 2.38
RTFDC1Q9BY42 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC29.93■■■□□ 2.38
RTFDC1Q9BY42 PROC-203ENST00000409048 1586 ntTSL 5 BASIC29.92■■■□□ 2.38
RTFDC1Q9BY42 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
RTFDC1Q9BY42 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC29.92■■■□□ 2.38
RTFDC1Q9BY42 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC29.91■■■□□ 2.38
RTFDC1Q9BY42 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
RTFDC1Q9BY42 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC29.91■■■□□ 2.38
RTFDC1Q9BY42 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC29.9■■■□□ 2.38
RTFDC1Q9BY42 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RTFDC1Q9BY42 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
RTFDC1Q9BY42 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC29.9■■■□□ 2.38
RTFDC1Q9BY42 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
RTFDC1Q9BY42 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
RTFDC1Q9BY42 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
RTFDC1Q9BY42 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
RTFDC1Q9BY42 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
RTFDC1Q9BY42 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC29.88■■■□□ 2.37
RTFDC1Q9BY42 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
RTFDC1Q9BY42 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
RTFDC1Q9BY42 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
RTFDC1Q9BY42 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
RTFDC1Q9BY42 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC29.87■■■□□ 2.37
RTFDC1Q9BY42 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
RTFDC1Q9BY42 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC29.86■■■□□ 2.37
RTFDC1Q9BY42 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RTFDC1Q9BY42 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC29.86■■■□□ 2.37
RTFDC1Q9BY42 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
RTFDC1Q9BY42 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
RTFDC1Q9BY42 LSM7-203ENST00000585409 512 ntTSL 2 BASIC29.86■■■□□ 2.37
RTFDC1Q9BY42 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
RTFDC1Q9BY42 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC29.86■■■□□ 2.37
RTFDC1Q9BY42 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RTFDC1Q9BY42 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC29.86■■■□□ 2.37
RTFDC1Q9BY42 AC139426.1-201ENST00000568218 2529 ntBASIC29.85■■■□□ 2.37
RTFDC1Q9BY42 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
RTFDC1Q9BY42 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
RTFDC1Q9BY42 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC29.85■■■□□ 2.37
RTFDC1Q9BY42 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
RTFDC1Q9BY42 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
RTFDC1Q9BY42 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC29.84■■■□□ 2.37
RTFDC1Q9BY42 AC022616.5-201ENST00000518796 181 ntBASIC29.84■■■□□ 2.37
RTFDC1Q9BY42 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
RTFDC1Q9BY42 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
RTFDC1Q9BY42 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
RTFDC1Q9BY42 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
RTFDC1Q9BY42 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC29.83■■■□□ 2.37
RTFDC1Q9BY42 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
RTFDC1Q9BY42 GRAMD4P7-201ENST00000578182 1232 ntBASIC29.83■■■□□ 2.37
RTFDC1Q9BY42 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
RTFDC1Q9BY42 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
RTFDC1Q9BY42 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC29.82■■■□□ 2.36
RTFDC1Q9BY42 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC29.82■■■□□ 2.36
RTFDC1Q9BY42 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
RTFDC1Q9BY42 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
RTFDC1Q9BY42 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
RTFDC1Q9BY42 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
RTFDC1Q9BY42 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC29.81■■■□□ 2.36
RTFDC1Q9BY42 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
RTFDC1Q9BY42 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
RTFDC1Q9BY42 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC29.81■■■□□ 2.36
RTFDC1Q9BY42 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC29.8■■■□□ 2.36
RTFDC1Q9BY42 KRT18P10-201ENST00000388836 1287 ntBASIC29.8■■■□□ 2.36
RTFDC1Q9BY42 MIR4787-201ENST00000607364 84 ntBASIC29.8■■■□□ 2.36
RTFDC1Q9BY42 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
RTFDC1Q9BY42 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
RTFDC1Q9BY42 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
RTFDC1Q9BY42 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
RTFDC1Q9BY42 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
RTFDC1Q9BY42 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC29.79■■■□□ 2.36
RTFDC1Q9BY42 AC008406.3-201ENST00000620001 1374 ntBASIC29.78■■■□□ 2.36
RTFDC1Q9BY42 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
RTFDC1Q9BY42 DRD5P2-201ENST00000421395 2012 ntBASIC29.78■■■□□ 2.36
RTFDC1Q9BY42 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC29.78■■■□□ 2.36
RTFDC1Q9BY42 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC29.78■■■□□ 2.36
RTFDC1Q9BY42 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC29.78■■■□□ 2.36
RTFDC1Q9BY42 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC29.78■■■□□ 2.36
RTFDC1Q9BY42 KRT125P-201ENST00000546827 989 ntBASIC29.78■■■□□ 2.36
RTFDC1Q9BY42 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.78■■■□□ 2.36
RTFDC1Q9BY42 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
RTFDC1Q9BY42 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
RTFDC1Q9BY42 KRT18P24-201ENST00000344739 1156 ntBASIC29.77■■■□□ 2.36
RTFDC1Q9BY42 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
RTFDC1Q9BY42 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
RTFDC1Q9BY42 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.35
RTFDC1Q9BY42 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC29.76■■■□□ 2.35
RTFDC1Q9BY42 BX664725.1-201ENST00000438252 379 ntBASIC29.76■■■□□ 2.35
RTFDC1Q9BY42 UNC93B8-201ENST00000511903 705 ntBASIC29.76■■■□□ 2.35
RTFDC1Q9BY42 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC29.76■■■□□ 2.35
RTFDC1Q9BY42 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
RTFDC1Q9BY42 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
RTFDC1Q9BY42 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC29.75■■■□□ 2.35
RTFDC1Q9BY42 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC29.75■■■□□ 2.35
RTFDC1Q9BY42 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC29.74■■■□□ 2.35
RTFDC1Q9BY42 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
RTFDC1Q9BY42 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC29.74■■■□□ 2.35
RTFDC1Q9BY42 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC29.74■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms