Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VGLL1Q99990 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
VGLL1Q99990 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VGLL1Q99990 AC008813.1-201ENST00000536597 885 ntBASIC18.19■□□□□ 0.5
VGLL1Q99990 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
VGLL1Q99990 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VGLL1Q99990 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
VGLL1Q99990 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VGLL1Q99990 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VGLL1Q99990 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VGLL1Q99990 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.18■□□□□ 0.5
VGLL1Q99990 AC142381.3-201ENST00000568208 1670 ntBASIC18.18■□□□□ 0.5
VGLL1Q99990 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VGLL1Q99990 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VGLL1Q99990 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VGLL1Q99990 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VGLL1Q99990 RPS2P35-201ENST00000443417 897 ntBASIC18.17■□□□□ 0.5
VGLL1Q99990 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
VGLL1Q99990 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
VGLL1Q99990 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VGLL1Q99990 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VGLL1Q99990 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VGLL1Q99990 AC096887.2-201ENST00000623443 1957 ntBASIC18.16■□□□□ 0.5
VGLL1Q99990 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.16■□□□□ 0.5
VGLL1Q99990 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VGLL1Q99990 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
VGLL1Q99990 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
VGLL1Q99990 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
VGLL1Q99990 AC022211.4-201ENST00000625094 2161 ntBASIC18.15■□□□□ 0.5
VGLL1Q99990 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL1Q99990 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL1Q99990 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL1Q99990 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL1Q99990 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
VGLL1Q99990 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.15■□□□□ 0.5
VGLL1Q99990 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
VGLL1Q99990 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.15■□□□□ 0.5
VGLL1Q99990 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.15■□□□□ 0.5
VGLL1Q99990 AC148477.6-201ENST00000623746 465 ntBASIC18.15■□□□□ 0.5
VGLL1Q99990 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
VGLL1Q99990 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL1Q99990 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VGLL1Q99990 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
VGLL1Q99990 AL359258.2-201ENST00000564063 1566 ntBASIC18.14■□□□□ 0.49
VGLL1Q99990 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VGLL1Q99990 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VGLL1Q99990 DUX4L11-201ENST00000611504 1267 ntBASIC18.14■□□□□ 0.49
VGLL1Q99990 DUX4L12-201ENST00000614593 1267 ntBASIC18.14■□□□□ 0.49
VGLL1Q99990 DUX4L14-201ENST00000621227 1267 ntBASIC18.14■□□□□ 0.49
VGLL1Q99990 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.14■□□□□ 0.49
VGLL1Q99990 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.14■□□□□ 0.49
VGLL1Q99990 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VGLL1Q99990 AC138932.3-201ENST00000567634 1902 ntBASIC18.13■□□□□ 0.49
VGLL1Q99990 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
VGLL1Q99990 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VGLL1Q99990 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VGLL1Q99990 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
VGLL1Q99990 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VGLL1Q99990 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.13■□□□□ 0.49
VGLL1Q99990 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.13■□□□□ 0.49
VGLL1Q99990 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.12■□□□□ 0.49
VGLL1Q99990 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VGLL1Q99990 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VGLL1Q99990 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.12■□□□□ 0.49
VGLL1Q99990 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VGLL1Q99990 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.12■□□□□ 0.49
VGLL1Q99990 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.12■□□□□ 0.49
VGLL1Q99990 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VGLL1Q99990 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VGLL1Q99990 AL359504.2-201ENST00000605506 1601 ntBASIC18.12■□□□□ 0.49
VGLL1Q99990 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VGLL1Q99990 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VGLL1Q99990 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.11■□□□□ 0.49
VGLL1Q99990 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL1Q99990 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL1Q99990 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL1Q99990 HLA-V-202ENST00000446817 847 ntBASIC18.11■□□□□ 0.49
VGLL1Q99990 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
VGLL1Q99990 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.11■□□□□ 0.49
VGLL1Q99990 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL1Q99990 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VGLL1Q99990 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.1■□□□□ 0.49
VGLL1Q99990 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.1■□□□□ 0.49
VGLL1Q99990 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VGLL1Q99990 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
VGLL1Q99990 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VGLL1Q99990 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
VGLL1Q99990 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
VGLL1Q99990 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VGLL1Q99990 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
VGLL1Q99990 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VGLL1Q99990 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.09■□□□□ 0.49
VGLL1Q99990 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
VGLL1Q99990 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VGLL1Q99990 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VGLL1Q99990 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.09■□□□□ 0.49
VGLL1Q99990 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.09■□□□□ 0.49
VGLL1Q99990 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
VGLL1Q99990 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
VGLL1Q99990 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms