Protein–RNA interactions for Protein: Q96N87

SLC6A18, Sodium-dependent neutral amino acid transporter B(0)AT3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A18Q96N87 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
SLC6A18Q96N87 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SLC6A18Q96N87 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SLC6A18Q96N87 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
SLC6A18Q96N87 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.1■■□□□ 1.45
SLC6A18Q96N87 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.1■■□□□ 1.45
SLC6A18Q96N87 RPS2P7-201ENST00000447334 885 ntBASIC24.1■■□□□ 1.45
SLC6A18Q96N87 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.1■■□□□ 1.45
SLC6A18Q96N87 LINC01003-201ENST00000564834 1764 ntBASIC24.1■■□□□ 1.45
SLC6A18Q96N87 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
SLC6A18Q96N87 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SLC6A18Q96N87 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SLC6A18Q96N87 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SLC6A18Q96N87 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.09■■□□□ 1.45
SLC6A18Q96N87 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.09■■□□□ 1.45
SLC6A18Q96N87 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SLC6A18Q96N87 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
SLC6A18Q96N87 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
SLC6A18Q96N87 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SLC6A18Q96N87 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.08■■□□□ 1.45
SLC6A18Q96N87 AC019171.1-201ENST00000601251 1056 ntBASIC24.08■■□□□ 1.45
SLC6A18Q96N87 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SLC6A18Q96N87 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
SLC6A18Q96N87 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.08■■□□□ 1.44
SLC6A18Q96N87 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SLC6A18Q96N87 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
SLC6A18Q96N87 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SLC6A18Q96N87 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SLC6A18Q96N87 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
SLC6A18Q96N87 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SLC6A18Q96N87 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
SLC6A18Q96N87 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
SLC6A18Q96N87 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
SLC6A18Q96N87 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SLC6A18Q96N87 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
SLC6A18Q96N87 GUSBP5-201ENST00000418136 578 ntBASIC24.06■■□□□ 1.44
SLC6A18Q96N87 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.06■■□□□ 1.44
SLC6A18Q96N87 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
SLC6A18Q96N87 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
SLC6A18Q96N87 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
SLC6A18Q96N87 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
SLC6A18Q96N87 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SLC6A18Q96N87 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SLC6A18Q96N87 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SLC6A18Q96N87 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
SLC6A18Q96N87 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.05■■□□□ 1.44
SLC6A18Q96N87 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SLC6A18Q96N87 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SLC6A18Q96N87 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SLC6A18Q96N87 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SLC6A18Q96N87 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SLC6A18Q96N87 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SLC6A18Q96N87 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SLC6A18Q96N87 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
SLC6A18Q96N87 LONRF2P2-201ENST00000439212 571 ntBASIC24.04■■□□□ 1.44
SLC6A18Q96N87 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.04■■□□□ 1.44
SLC6A18Q96N87 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SLC6A18Q96N87 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SLC6A18Q96N87 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.03■■□□□ 1.44
SLC6A18Q96N87 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
SLC6A18Q96N87 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.03■■□□□ 1.44
SLC6A18Q96N87 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.03■■□□□ 1.44
SLC6A18Q96N87 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SLC6A18Q96N87 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
SLC6A18Q96N87 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SLC6A18Q96N87 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
SLC6A18Q96N87 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SLC6A18Q96N87 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SLC6A18Q96N87 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
SLC6A18Q96N87 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
SLC6A18Q96N87 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SLC6A18Q96N87 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
SLC6A18Q96N87 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.02■■□□□ 1.44
SLC6A18Q96N87 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
SLC6A18Q96N87 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.01■■□□□ 1.43
SLC6A18Q96N87 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.01■■□□□ 1.43
SLC6A18Q96N87 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SLC6A18Q96N87 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SLC6A18Q96N87 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.01■■□□□ 1.43
SLC6A18Q96N87 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SLC6A18Q96N87 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24■■□□□ 1.43
SLC6A18Q96N87 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24■■□□□ 1.43
SLC6A18Q96N87 AC131212.1-201ENST00000613771 668 ntBASIC24■■□□□ 1.43
SLC6A18Q96N87 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SLC6A18Q96N87 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC24■■□□□ 1.43
SLC6A18Q96N87 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24■■□□□ 1.43
SLC6A18Q96N87 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24■■□□□ 1.43
SLC6A18Q96N87 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SLC6A18Q96N87 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SLC6A18Q96N87 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.99■■□□□ 1.43
SLC6A18Q96N87 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SLC6A18Q96N87 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SLC6A18Q96N87 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.99■■□□□ 1.43
SLC6A18Q96N87 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.99■■□□□ 1.43
SLC6A18Q96N87 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
SLC6A18Q96N87 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.99■■□□□ 1.43
SLC6A18Q96N87 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SLC6A18Q96N87 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SLC6A18Q96N87 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
SLC6A18Q96N87 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms