Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.86■□□□□ 0.77
R3HDM4Q96D70 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HDM4Q96D70 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HDM4Q96D70 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
R3HDM4Q96D70 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
R3HDM4Q96D70 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.86■□□□□ 0.77
R3HDM4Q96D70 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.86■□□□□ 0.77
R3HDM4Q96D70 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
R3HDM4Q96D70 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HDM4Q96D70 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
R3HDM4Q96D70 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.86■□□□□ 0.77
R3HDM4Q96D70 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
R3HDM4Q96D70 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
R3HDM4Q96D70 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.85■□□□□ 0.77
R3HDM4Q96D70 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
R3HDM4Q96D70 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
R3HDM4Q96D70 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
R3HDM4Q96D70 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.84■□□□□ 0.77
R3HDM4Q96D70 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
R3HDM4Q96D70 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
R3HDM4Q96D70 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
R3HDM4Q96D70 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
R3HDM4Q96D70 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
R3HDM4Q96D70 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
R3HDM4Q96D70 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
R3HDM4Q96D70 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
R3HDM4Q96D70 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.83■□□□□ 0.76
R3HDM4Q96D70 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
R3HDM4Q96D70 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
R3HDM4Q96D70 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
R3HDM4Q96D70 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.82■□□□□ 0.76
R3HDM4Q96D70 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
R3HDM4Q96D70 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
R3HDM4Q96D70 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
R3HDM4Q96D70 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
R3HDM4Q96D70 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
R3HDM4Q96D70 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
R3HDM4Q96D70 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
R3HDM4Q96D70 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
R3HDM4Q96D70 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
R3HDM4Q96D70 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.81■□□□□ 0.76
R3HDM4Q96D70 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.81■□□□□ 0.76
R3HDM4Q96D70 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
R3HDM4Q96D70 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HDM4Q96D70 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.8■□□□□ 0.76
R3HDM4Q96D70 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
R3HDM4Q96D70 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
R3HDM4Q96D70 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
R3HDM4Q96D70 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HDM4Q96D70 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HDM4Q96D70 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
R3HDM4Q96D70 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
R3HDM4Q96D70 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.8■□□□□ 0.76
R3HDM4Q96D70 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.79■□□□□ 0.76
R3HDM4Q96D70 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.79■□□□□ 0.76
R3HDM4Q96D70 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
R3HDM4Q96D70 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HDM4Q96D70 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
R3HDM4Q96D70 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
R3HDM4Q96D70 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
R3HDM4Q96D70 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
R3HDM4Q96D70 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.78■□□□□ 0.76
R3HDM4Q96D70 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
R3HDM4Q96D70 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
R3HDM4Q96D70 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
R3HDM4Q96D70 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
R3HDM4Q96D70 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
R3HDM4Q96D70 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
R3HDM4Q96D70 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
R3HDM4Q96D70 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
R3HDM4Q96D70 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
R3HDM4Q96D70 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
R3HDM4Q96D70 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3HDM4Q96D70 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
R3HDM4Q96D70 AC010501.1-201ENST00000606270 1962 ntBASIC19.76■□□□□ 0.75
R3HDM4Q96D70 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.76■□□□□ 0.75
R3HDM4Q96D70 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.76■□□□□ 0.75
R3HDM4Q96D70 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3HDM4Q96D70 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
R3HDM4Q96D70 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
R3HDM4Q96D70 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.76■□□□□ 0.75
R3HDM4Q96D70 ERN1-208ENST00000606895 2068 ntBASIC19.75■□□□□ 0.75
R3HDM4Q96D70 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
R3HDM4Q96D70 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3HDM4Q96D70 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
R3HDM4Q96D70 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3HDM4Q96D70 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
R3HDM4Q96D70 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.75■□□□□ 0.75
R3HDM4Q96D70 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
R3HDM4Q96D70 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
R3HDM4Q96D70 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
R3HDM4Q96D70 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.74■□□□□ 0.75
R3HDM4Q96D70 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3HDM4Q96D70 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
R3HDM4Q96D70 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
R3HDM4Q96D70 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
R3HDM4Q96D70 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.74■□□□□ 0.75
R3HDM4Q96D70 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
R3HDM4Q96D70 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.73■□□□□ 0.75
R3HDM4Q96D70 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms