Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXRED1Q96CU9 DUX4L11-201ENST00000611504 1267 ntBASIC20.88■□□□□ 0.93
FOXRED1Q96CU9 DUX4L12-201ENST00000614593 1267 ntBASIC20.88■□□□□ 0.93
FOXRED1Q96CU9 DUX4L14-201ENST00000621227 1267 ntBASIC20.88■□□□□ 0.93
FOXRED1Q96CU9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
FOXRED1Q96CU9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.88■□□□□ 0.93
FOXRED1Q96CU9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXRED1Q96CU9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXRED1Q96CU9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXRED1Q96CU9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
FOXRED1Q96CU9 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
FOXRED1Q96CU9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXRED1Q96CU9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
FOXRED1Q96CU9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.87■□□□□ 0.93
FOXRED1Q96CU9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXRED1Q96CU9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.87■□□□□ 0.93
FOXRED1Q96CU9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXRED1Q96CU9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXRED1Q96CU9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
FOXRED1Q96CU9 AC022211.4-201ENST00000625094 2161 ntBASIC20.86■□□□□ 0.93
FOXRED1Q96CU9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXRED1Q96CU9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXRED1Q96CU9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
FOXRED1Q96CU9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
FOXRED1Q96CU9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.86■□□□□ 0.93
FOXRED1Q96CU9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXRED1Q96CU9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXRED1Q96CU9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXRED1Q96CU9 AC008813.1-201ENST00000536597 885 ntBASIC20.85■□□□□ 0.93
FOXRED1Q96CU9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
FOXRED1Q96CU9 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXRED1Q96CU9 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXRED1Q96CU9 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXRED1Q96CU9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
FOXRED1Q96CU9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.84■□□□□ 0.93
FOXRED1Q96CU9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.84■□□□□ 0.93
FOXRED1Q96CU9 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.84■□□□□ 0.93
FOXRED1Q96CU9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
FOXRED1Q96CU9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.84■□□□□ 0.93
FOXRED1Q96CU9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
FOXRED1Q96CU9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
FOXRED1Q96CU9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FOXRED1Q96CU9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
FOXRED1Q96CU9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
FOXRED1Q96CU9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
FOXRED1Q96CU9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXRED1Q96CU9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
FOXRED1Q96CU9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
FOXRED1Q96CU9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.82■□□□□ 0.92
FOXRED1Q96CU9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.82■□□□□ 0.92
FOXRED1Q96CU9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.82■□□□□ 0.92
FOXRED1Q96CU9 DUX4L13-201ENST00000554103 1267 ntBASIC20.81■□□□□ 0.92
FOXRED1Q96CU9 DUX4L15-201ENST00000611059 1267 ntBASIC20.81■□□□□ 0.92
FOXRED1Q96CU9 DUX4L23-201ENST00000615195 1269 ntBASIC20.81■□□□□ 0.92
FOXRED1Q96CU9 DUX4L24-201ENST00000617576 1269 ntBASIC20.81■□□□□ 0.92
FOXRED1Q96CU9 DUX4L22-201ENST00000618238 1269 ntBASIC20.81■□□□□ 0.92
FOXRED1Q96CU9 DUX4L20-201ENST00000619712 1269 ntBASIC20.81■□□□□ 0.92
FOXRED1Q96CU9 DUX4L21-201ENST00000622058 1269 ntBASIC20.81■□□□□ 0.92
FOXRED1Q96CU9 DUX4L10-201ENST00000622460 1267 ntBASIC20.81■□□□□ 0.92
FOXRED1Q96CU9 DUX4L25-201ENST00000624915 1269 ntBASIC20.81■□□□□ 0.92
FOXRED1Q96CU9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXRED1Q96CU9 AC138932.3-201ENST00000567634 1902 ntBASIC20.8■□□□□ 0.92
FOXRED1Q96CU9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXRED1Q96CU9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXRED1Q96CU9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXRED1Q96CU9 AC096887.2-201ENST00000623443 1957 ntBASIC20.8■□□□□ 0.92
FOXRED1Q96CU9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FOXRED1Q96CU9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.8■□□□□ 0.92
FOXRED1Q96CU9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXRED1Q96CU9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
FOXRED1Q96CU9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
FOXRED1Q96CU9 AL139125.2-201ENST00000623134 1869 ntBASIC20.79■□□□□ 0.92
FOXRED1Q96CU9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
FOXRED1Q96CU9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXRED1Q96CU9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FOXRED1Q96CU9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FOXRED1Q96CU9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FOXRED1Q96CU9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXRED1Q96CU9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXRED1Q96CU9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FOXRED1Q96CU9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
FOXRED1Q96CU9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXRED1Q96CU9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FOXRED1Q96CU9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FOXRED1Q96CU9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FOXRED1Q96CU9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXRED1Q96CU9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXRED1Q96CU9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXRED1Q96CU9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXRED1Q96CU9 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXRED1Q96CU9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXRED1Q96CU9 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXRED1Q96CU9 AC148477.6-201ENST00000623746 465 ntBASIC20.77■□□□□ 0.92
FOXRED1Q96CU9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FOXRED1Q96CU9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
FOXRED1Q96CU9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXRED1Q96CU9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.76■□□□□ 0.91
FOXRED1Q96CU9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.76■□□□□ 0.91
FOXRED1Q96CU9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
FOXRED1Q96CU9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms