Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.68■■□□□ 1.7
UBA3Q8TBC4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.68■■□□□ 1.7
UBA3Q8TBC4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.68■■□□□ 1.7
UBA3Q8TBC4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
UBA3Q8TBC4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.68■■□□□ 1.7
UBA3Q8TBC4 RAP2CP1-202ENST00000605179 643 ntBASIC25.68■■□□□ 1.7
UBA3Q8TBC4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
UBA3Q8TBC4 AC091060.1-201ENST00000623524 1766 ntBASIC25.67■■□□□ 1.7
UBA3Q8TBC4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
UBA3Q8TBC4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.67■■□□□ 1.7
UBA3Q8TBC4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
UBA3Q8TBC4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.67■■□□□ 1.7
UBA3Q8TBC4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.67■■□□□ 1.7
UBA3Q8TBC4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
UBA3Q8TBC4 AC092803.2-201ENST00000564287 1899 ntBASIC25.66■■□□□ 1.7
UBA3Q8TBC4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
UBA3Q8TBC4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
UBA3Q8TBC4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.66■■□□□ 1.7
UBA3Q8TBC4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
UBA3Q8TBC4 ERN1-208ENST00000606895 2068 ntBASIC25.65■■□□□ 1.7
UBA3Q8TBC4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
UBA3Q8TBC4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
UBA3Q8TBC4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.65■■□□□ 1.7
UBA3Q8TBC4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
UBA3Q8TBC4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
UBA3Q8TBC4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
UBA3Q8TBC4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
UBA3Q8TBC4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
UBA3Q8TBC4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.64■■□□□ 1.69
UBA3Q8TBC4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
UBA3Q8TBC4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
UBA3Q8TBC4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
UBA3Q8TBC4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
UBA3Q8TBC4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.63■■□□□ 1.69
UBA3Q8TBC4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.62■■□□□ 1.69
UBA3Q8TBC4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
UBA3Q8TBC4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.62■■□□□ 1.69
UBA3Q8TBC4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
UBA3Q8TBC4 AL592293.1-201ENST00000502889 1188 ntBASIC25.62■■□□□ 1.69
UBA3Q8TBC4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.62■■□□□ 1.69
UBA3Q8TBC4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
UBA3Q8TBC4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
UBA3Q8TBC4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
UBA3Q8TBC4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
UBA3Q8TBC4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.61■■□□□ 1.69
UBA3Q8TBC4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
UBA3Q8TBC4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
UBA3Q8TBC4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
UBA3Q8TBC4 NTF6A-201ENST00000591175 560 ntBASIC25.59■■□□□ 1.69
UBA3Q8TBC4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.59■■□□□ 1.69
UBA3Q8TBC4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
UBA3Q8TBC4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.58■■□□□ 1.69
UBA3Q8TBC4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
UBA3Q8TBC4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
UBA3Q8TBC4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
UBA3Q8TBC4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.58■■□□□ 1.68
UBA3Q8TBC4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.57■■□□□ 1.68
UBA3Q8TBC4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
UBA3Q8TBC4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
UBA3Q8TBC4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.57■■□□□ 1.68
UBA3Q8TBC4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
UBA3Q8TBC4 KRT18P60-201ENST00000312876 1297 ntBASIC25.56■■□□□ 1.68
UBA3Q8TBC4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
UBA3Q8TBC4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
UBA3Q8TBC4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.56■■□□□ 1.68
UBA3Q8TBC4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
UBA3Q8TBC4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.55■■□□□ 1.68
UBA3Q8TBC4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
UBA3Q8TBC4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
UBA3Q8TBC4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
UBA3Q8TBC4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.54■■□□□ 1.68
UBA3Q8TBC4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
UBA3Q8TBC4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.54■■□□□ 1.68
UBA3Q8TBC4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
UBA3Q8TBC4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.54■■□□□ 1.68
UBA3Q8TBC4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
UBA3Q8TBC4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
UBA3Q8TBC4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
UBA3Q8TBC4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.53■■□□□ 1.68
UBA3Q8TBC4 AC145676.1-201ENST00000514988 2004 ntBASIC25.53■■□□□ 1.68
UBA3Q8TBC4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
UBA3Q8TBC4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
UBA3Q8TBC4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
UBA3Q8TBC4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
UBA3Q8TBC4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.51■■□□□ 1.67
UBA3Q8TBC4 SPCS2P3-201ENST00000500401 656 ntBASIC25.51■■□□□ 1.67
UBA3Q8TBC4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.51■■□□□ 1.67
UBA3Q8TBC4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
UBA3Q8TBC4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms