Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.68■■□□□ 1.7
UBA3Q8TBC4 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.68■■□□□ 1.7
UBA3Q8TBC4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC25.68■■□□□ 1.7
UBA3Q8TBC4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
UBA3Q8TBC4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.68■■□□□ 1.7
UBA3Q8TBC4 RAP2CP1-202ENST00000605179 643 ntBASIC25.68■■□□□ 1.7
UBA3Q8TBC4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
UBA3Q8TBC4 AC091060.1-201ENST00000623524 1766 ntBASIC25.67■■□□□ 1.7
UBA3Q8TBC4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
UBA3Q8TBC4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.67■■□□□ 1.7
UBA3Q8TBC4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
UBA3Q8TBC4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.67■■□□□ 1.7
UBA3Q8TBC4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.67■■□□□ 1.7
UBA3Q8TBC4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
UBA3Q8TBC4 AC092803.2-201ENST00000564287 1899 ntBASIC25.66■■□□□ 1.7
UBA3Q8TBC4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
UBA3Q8TBC4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
UBA3Q8TBC4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.66■■□□□ 1.7
UBA3Q8TBC4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
UBA3Q8TBC4 ERN1-208ENST00000606895 2068 ntBASIC25.65■■□□□ 1.7
UBA3Q8TBC4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
UBA3Q8TBC4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
UBA3Q8TBC4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.65■■□□□ 1.7
UBA3Q8TBC4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
UBA3Q8TBC4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
UBA3Q8TBC4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
UBA3Q8TBC4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
UBA3Q8TBC4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
UBA3Q8TBC4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.64■■□□□ 1.69
UBA3Q8TBC4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
UBA3Q8TBC4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
UBA3Q8TBC4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
UBA3Q8TBC4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
UBA3Q8TBC4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.63■■□□□ 1.69
UBA3Q8TBC4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.62■■□□□ 1.69
UBA3Q8TBC4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
UBA3Q8TBC4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.62■■□□□ 1.69
UBA3Q8TBC4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
UBA3Q8TBC4 AL592293.1-201ENST00000502889 1188 ntBASIC25.62■■□□□ 1.69
UBA3Q8TBC4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.62■■□□□ 1.69
UBA3Q8TBC4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
UBA3Q8TBC4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
UBA3Q8TBC4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
UBA3Q8TBC4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
UBA3Q8TBC4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.61■■□□□ 1.69
UBA3Q8TBC4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
UBA3Q8TBC4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
UBA3Q8TBC4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
UBA3Q8TBC4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
UBA3Q8TBC4 NTF6A-201ENST00000591175 560 ntBASIC25.59■■□□□ 1.69
UBA3Q8TBC4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.59■■□□□ 1.69
UBA3Q8TBC4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
UBA3Q8TBC4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC25.58■■□□□ 1.69
UBA3Q8TBC4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
UBA3Q8TBC4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
UBA3Q8TBC4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
UBA3Q8TBC4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.58■■□□□ 1.68
UBA3Q8TBC4 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.57■■□□□ 1.68
UBA3Q8TBC4 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
UBA3Q8TBC4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
UBA3Q8TBC4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.57■■□□□ 1.68
UBA3Q8TBC4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
UBA3Q8TBC4 KRT18P60-201ENST00000312876 1297 ntBASIC25.56■■□□□ 1.68
UBA3Q8TBC4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
UBA3Q8TBC4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
UBA3Q8TBC4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.56■■□□□ 1.68
UBA3Q8TBC4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
UBA3Q8TBC4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC25.55■■□□□ 1.68
UBA3Q8TBC4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
UBA3Q8TBC4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
UBA3Q8TBC4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
UBA3Q8TBC4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.54■■□□□ 1.68
UBA3Q8TBC4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
UBA3Q8TBC4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.54■■□□□ 1.68
UBA3Q8TBC4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
UBA3Q8TBC4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.54■■□□□ 1.68
UBA3Q8TBC4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
UBA3Q8TBC4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
UBA3Q8TBC4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
UBA3Q8TBC4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.53■■□□□ 1.68
UBA3Q8TBC4 AC145676.1-201ENST00000514988 2004 ntBASIC25.53■■□□□ 1.68
UBA3Q8TBC4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
UBA3Q8TBC4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
UBA3Q8TBC4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
UBA3Q8TBC4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
UBA3Q8TBC4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.51■■□□□ 1.67
UBA3Q8TBC4 SPCS2P3-201ENST00000500401 656 ntBASIC25.51■■□□□ 1.67
UBA3Q8TBC4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.51■■□□□ 1.67
UBA3Q8TBC4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
UBA3Q8TBC4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms