Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.71■□□□□ 0.91
BEST4Q8NFU0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.71■□□□□ 0.91
BEST4Q8NFU0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
BEST4Q8NFU0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BEST4Q8NFU0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BEST4Q8NFU0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BEST4Q8NFU0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BEST4Q8NFU0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.7■□□□□ 0.9
BEST4Q8NFU0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BEST4Q8NFU0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST4Q8NFU0 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BEST4Q8NFU0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.69■□□□□ 0.9
BEST4Q8NFU0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
BEST4Q8NFU0 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.69■□□□□ 0.9
BEST4Q8NFU0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.69■□□□□ 0.9
BEST4Q8NFU0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
BEST4Q8NFU0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BEST4Q8NFU0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
BEST4Q8NFU0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
BEST4Q8NFU0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
BEST4Q8NFU0 WHAMMP3-201ENST00000611636 1609 ntBASIC20.68■□□□□ 0.9
BEST4Q8NFU0 AC022211.4-201ENST00000625094 2161 ntBASIC20.68■□□□□ 0.9
BEST4Q8NFU0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BEST4Q8NFU0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
BEST4Q8NFU0 DUX4L28-201ENST00000623687 678 ntBASIC20.68■□□□□ 0.9
BEST4Q8NFU0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BEST4Q8NFU0 AC068473.5-201ENST00000616428 2072 ntBASIC20.68■□□□□ 0.9
BEST4Q8NFU0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BEST4Q8NFU0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.67■□□□□ 0.9
BEST4Q8NFU0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.67■□□□□ 0.9
BEST4Q8NFU0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BEST4Q8NFU0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BEST4Q8NFU0 AC110285.7-201ENST00000624417 1536 ntBASIC20.67■□□□□ 0.9
BEST4Q8NFU0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BEST4Q8NFU0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BEST4Q8NFU0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST4Q8NFU0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST4Q8NFU0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BEST4Q8NFU0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BEST4Q8NFU0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BEST4Q8NFU0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BEST4Q8NFU0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST4Q8NFU0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.65■□□□□ 0.9
BEST4Q8NFU0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST4Q8NFU0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BEST4Q8NFU0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BEST4Q8NFU0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BEST4Q8NFU0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
BEST4Q8NFU0 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
BEST4Q8NFU0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.64■□□□□ 0.89
BEST4Q8NFU0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.64■□□□□ 0.89
BEST4Q8NFU0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
BEST4Q8NFU0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BEST4Q8NFU0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BEST4Q8NFU0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.63■□□□□ 0.89
BEST4Q8NFU0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
BEST4Q8NFU0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BEST4Q8NFU0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BEST4Q8NFU0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BEST4Q8NFU0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BEST4Q8NFU0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.62■□□□□ 0.89
BEST4Q8NFU0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.62■□□□□ 0.89
BEST4Q8NFU0 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BEST4Q8NFU0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
BEST4Q8NFU0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BEST4Q8NFU0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BEST4Q8NFU0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BEST4Q8NFU0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
BEST4Q8NFU0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BEST4Q8NFU0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST4Q8NFU0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BEST4Q8NFU0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.6■□□□□ 0.89
BEST4Q8NFU0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.6■□□□□ 0.89
BEST4Q8NFU0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
BEST4Q8NFU0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.6■□□□□ 0.89
BEST4Q8NFU0 MIR3665-201ENST00000578708 105 ntBASIC20.6■□□□□ 0.89
BEST4Q8NFU0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.6■□□□□ 0.89
BEST4Q8NFU0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BEST4Q8NFU0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.6■□□□□ 0.89
BEST4Q8NFU0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BEST4Q8NFU0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.59■□□□□ 0.89
BEST4Q8NFU0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
BEST4Q8NFU0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BEST4Q8NFU0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BEST4Q8NFU0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BEST4Q8NFU0 AC079834.2-201ENST00000609776 1949 ntBASIC20.59■□□□□ 0.89
BEST4Q8NFU0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BEST4Q8NFU0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BEST4Q8NFU0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BEST4Q8NFU0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
BEST4Q8NFU0 AC010501.1-201ENST00000606270 1962 ntBASIC20.58■□□□□ 0.89
BEST4Q8NFU0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BEST4Q8NFU0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BEST4Q8NFU0 CLDN5-201ENST00000403084 2357 ntBASIC20.58■□□□□ 0.88
BEST4Q8NFU0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
BEST4Q8NFU0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.57■□□□□ 0.88
BEST4Q8NFU0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.57■□□□□ 0.88
BEST4Q8NFU0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BEST4Q8NFU0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BEST4Q8NFU0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms