Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
PCDH20Q8N6Y1 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDH20Q8N6Y1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
PCDH20Q8N6Y1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDH20Q8N6Y1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH20Q8N6Y1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
PCDH20Q8N6Y1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.67■■□□□ 1.54
PCDH20Q8N6Y1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
PCDH20Q8N6Y1 AL033527.3-201ENST00000566366 1196 ntBASIC24.67■■□□□ 1.54
PCDH20Q8N6Y1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH20Q8N6Y1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDH20Q8N6Y1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.67■■□□□ 1.54
PCDH20Q8N6Y1 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH20Q8N6Y1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH20Q8N6Y1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH20Q8N6Y1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
PCDH20Q8N6Y1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH20Q8N6Y1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
PCDH20Q8N6Y1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH20Q8N6Y1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH20Q8N6Y1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDH20Q8N6Y1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDH20Q8N6Y1 DUX4L9-201ENST00000449051 1259 ntBASIC24.65■■□□□ 1.54
PCDH20Q8N6Y1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.65■■□□□ 1.54
PCDH20Q8N6Y1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.65■■□□□ 1.54
PCDH20Q8N6Y1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.65■■□□□ 1.54
PCDH20Q8N6Y1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDH20Q8N6Y1 AC135731.1-201ENST00000569415 2548 ntBASIC24.64■■□□□ 1.54
PCDH20Q8N6Y1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PCDH20Q8N6Y1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDH20Q8N6Y1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PCDH20Q8N6Y1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH20Q8N6Y1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH20Q8N6Y1 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH20Q8N6Y1 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH20Q8N6Y1 SPCS2P3-201ENST00000500401 656 ntBASIC24.63■■□□□ 1.53
PCDH20Q8N6Y1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDH20Q8N6Y1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH20Q8N6Y1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH20Q8N6Y1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH20Q8N6Y1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDH20Q8N6Y1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.62■■□□□ 1.53
PCDH20Q8N6Y1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH20Q8N6Y1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDH20Q8N6Y1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDH20Q8N6Y1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDH20Q8N6Y1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDH20Q8N6Y1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDH20Q8N6Y1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.6■■□□□ 1.53
PCDH20Q8N6Y1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDH20Q8N6Y1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.6■■□□□ 1.53
PCDH20Q8N6Y1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
PCDH20Q8N6Y1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDH20Q8N6Y1 AC018755.3-202ENST00000596210 929 ntBASIC24.6■■□□□ 1.53
PCDH20Q8N6Y1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH20Q8N6Y1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH20Q8N6Y1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH20Q8N6Y1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH20Q8N6Y1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH20Q8N6Y1 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH20Q8N6Y1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH20Q8N6Y1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
PCDH20Q8N6Y1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH20Q8N6Y1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH20Q8N6Y1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.59■■□□□ 1.53
PCDH20Q8N6Y1 DUX4L18-201ENST00000553347 1267 ntBASIC24.59■■□□□ 1.53
PCDH20Q8N6Y1 MIR6765-201ENST00000614092 87 ntBASIC24.59■■□□□ 1.53
PCDH20Q8N6Y1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH20Q8N6Y1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDH20Q8N6Y1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.59■■□□□ 1.53
PCDH20Q8N6Y1 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.58■■□□□ 1.53
PCDH20Q8N6Y1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDH20Q8N6Y1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDH20Q8N6Y1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.58■■□□□ 1.53
PCDH20Q8N6Y1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.58■■□□□ 1.52
PCDH20Q8N6Y1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC24.57■■□□□ 1.52
PCDH20Q8N6Y1 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
PCDH20Q8N6Y1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.57■■□□□ 1.52
PCDH20Q8N6Y1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.57■■□□□ 1.52
PCDH20Q8N6Y1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.57■■□□□ 1.52
PCDH20Q8N6Y1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDH20Q8N6Y1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.57■■□□□ 1.52
PCDH20Q8N6Y1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.56■■□□□ 1.52
PCDH20Q8N6Y1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH20Q8N6Y1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDH20Q8N6Y1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDH20Q8N6Y1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDH20Q8N6Y1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
PCDH20Q8N6Y1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDH20Q8N6Y1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDH20Q8N6Y1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
PCDH20Q8N6Y1 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDH20Q8N6Y1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDH20Q8N6Y1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDH20Q8N6Y1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.55■■□□□ 1.52
PCDH20Q8N6Y1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDH20Q8N6Y1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PCDH20Q8N6Y1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
PCDH20Q8N6Y1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDH20Q8N6Y1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms