Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RAB42Q8N4Z0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
RAB42Q8N4Z0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
RAB42Q8N4Z0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.51■■□□□ 1.35
RAB42Q8N4Z0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
RAB42Q8N4Z0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RAB42Q8N4Z0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
RAB42Q8N4Z0 RAP2CP1-202ENST00000605179 643 ntBASIC23.51■■□□□ 1.35
RAB42Q8N4Z0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
RAB42Q8N4Z0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.51■■□□□ 1.35
RAB42Q8N4Z0 AC009831.1-201ENST00000580420 1582 ntBASIC23.51■■□□□ 1.35
RAB42Q8N4Z0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RAB42Q8N4Z0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RAB42Q8N4Z0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
RAB42Q8N4Z0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RAB42Q8N4Z0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.51■■□□□ 1.35
RAB42Q8N4Z0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
RAB42Q8N4Z0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RAB42Q8N4Z0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RAB42Q8N4Z0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RAB42Q8N4Z0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.5■■□□□ 1.35
RAB42Q8N4Z0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.5■■□□□ 1.35
RAB42Q8N4Z0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RAB42Q8N4Z0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
RAB42Q8N4Z0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RAB42Q8N4Z0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RAB42Q8N4Z0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.49■■□□□ 1.35
RAB42Q8N4Z0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RAB42Q8N4Z0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RAB42Q8N4Z0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RAB42Q8N4Z0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RAB42Q8N4Z0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RAB42Q8N4Z0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RAB42Q8N4Z0 NTF6A-201ENST00000591175 560 ntBASIC23.48■■□□□ 1.35
RAB42Q8N4Z0 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.48■■□□□ 1.35
RAB42Q8N4Z0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RAB42Q8N4Z0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.47■■□□□ 1.35
RAB42Q8N4Z0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RAB42Q8N4Z0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.47■■□□□ 1.35
RAB42Q8N4Z0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
RAB42Q8N4Z0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RAB42Q8N4Z0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RAB42Q8N4Z0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
RAB42Q8N4Z0 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.46■■□□□ 1.35
RAB42Q8N4Z0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.46■■□□□ 1.35
RAB42Q8N4Z0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RAB42Q8N4Z0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RAB42Q8N4Z0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RAB42Q8N4Z0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RAB42Q8N4Z0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RAB42Q8N4Z0 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
RAB42Q8N4Z0 U85056.1-201ENST00000616429 682 ntBASIC23.45■■□□□ 1.34
RAB42Q8N4Z0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.44■■□□□ 1.34
RAB42Q8N4Z0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.44■■□□□ 1.34
RAB42Q8N4Z0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
RAB42Q8N4Z0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.44■■□□□ 1.34
RAB42Q8N4Z0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RAB42Q8N4Z0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RAB42Q8N4Z0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RAB42Q8N4Z0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RAB42Q8N4Z0 AL592293.1-201ENST00000502889 1188 ntBASIC23.43■■□□□ 1.34
RAB42Q8N4Z0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
RAB42Q8N4Z0 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.43■■□□□ 1.34
RAB42Q8N4Z0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.43■■□□□ 1.34
RAB42Q8N4Z0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
RAB42Q8N4Z0 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
RAB42Q8N4Z0 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RAB42Q8N4Z0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RAB42Q8N4Z0 KRT18P10-201ENST00000388836 1287 ntBASIC23.42■■□□□ 1.34
RAB42Q8N4Z0 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.42■■□□□ 1.34
RAB42Q8N4Z0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.42■■□□□ 1.34
RAB42Q8N4Z0 AC092803.2-201ENST00000564287 1899 ntBASIC23.42■■□□□ 1.34
RAB42Q8N4Z0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RAB42Q8N4Z0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RAB42Q8N4Z0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
RAB42Q8N4Z0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
RAB42Q8N4Z0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RAB42Q8N4Z0 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.41■■□□□ 1.34
RAB42Q8N4Z0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.41■■□□□ 1.34
RAB42Q8N4Z0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RAB42Q8N4Z0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RAB42Q8N4Z0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
RAB42Q8N4Z0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RAB42Q8N4Z0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RAB42Q8N4Z0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.39■■□□□ 1.33
RAB42Q8N4Z0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.39■■□□□ 1.33
RAB42Q8N4Z0 AC018755.3-202ENST00000596210 929 ntBASIC23.39■■□□□ 1.33
RAB42Q8N4Z0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
RAB42Q8N4Z0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
RAB42Q8N4Z0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RAB42Q8N4Z0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.39■■□□□ 1.33
RAB42Q8N4Z0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
RAB42Q8N4Z0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAB42Q8N4Z0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RAB42Q8N4Z0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RAB42Q8N4Z0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RAB42Q8N4Z0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RAB42Q8N4Z0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RAB42Q8N4Z0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.38■■□□□ 1.33
RAB42Q8N4Z0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms