Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
PGBD3Q8N328 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
PGBD3Q8N328 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PGBD3Q8N328 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
PGBD3Q8N328 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.59■■□□□ 1.53
PGBD3Q8N328 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
PGBD3Q8N328 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.59■■□□□ 1.53
PGBD3Q8N328 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
PGBD3Q8N328 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PGBD3Q8N328 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PGBD3Q8N328 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PGBD3Q8N328 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.58■■□□□ 1.53
PGBD3Q8N328 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.58■■□□□ 1.53
PGBD3Q8N328 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.58■■□□□ 1.53
PGBD3Q8N328 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
PGBD3Q8N328 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PGBD3Q8N328 AL592295.1-201ENST00000400984 884 ntBASIC24.57■■□□□ 1.52
PGBD3Q8N328 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.57■■□□□ 1.52
PGBD3Q8N328 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PGBD3Q8N328 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.57■■□□□ 1.52
PGBD3Q8N328 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
PGBD3Q8N328 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.57■■□□□ 1.52
PGBD3Q8N328 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.57■■□□□ 1.52
PGBD3Q8N328 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PGBD3Q8N328 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PGBD3Q8N328 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PGBD3Q8N328 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.56■■□□□ 1.52
PGBD3Q8N328 GUSBP5-201ENST00000418136 578 ntBASIC24.56■■□□□ 1.52
PGBD3Q8N328 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.56■■□□□ 1.52
PGBD3Q8N328 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PGBD3Q8N328 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PGBD3Q8N328 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.55■■□□□ 1.52
PGBD3Q8N328 THA1P-201ENST00000590384 1145 ntBASIC24.55■■□□□ 1.52
PGBD3Q8N328 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PGBD3Q8N328 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.54■■□□□ 1.52
PGBD3Q8N328 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
PGBD3Q8N328 AC087393.1-201ENST00000582896 145 ntBASIC24.54■■□□□ 1.52
PGBD3Q8N328 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
PGBD3Q8N328 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PGBD3Q8N328 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PGBD3Q8N328 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PGBD3Q8N328 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PGBD3Q8N328 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.53■■□□□ 1.52
PGBD3Q8N328 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PGBD3Q8N328 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PGBD3Q8N328 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PGBD3Q8N328 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
PGBD3Q8N328 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PGBD3Q8N328 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PGBD3Q8N328 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PGBD3Q8N328 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.52■■□□□ 1.52
PGBD3Q8N328 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.52■■□□□ 1.52
PGBD3Q8N328 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
PGBD3Q8N328 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PGBD3Q8N328 DRD5P2-201ENST00000421395 2012 ntBASIC24.52■■□□□ 1.52
PGBD3Q8N328 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PGBD3Q8N328 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.51■■□□□ 1.51
PGBD3Q8N328 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PGBD3Q8N328 RPS2P7-201ENST00000447334 885 ntBASIC24.51■■□□□ 1.51
PGBD3Q8N328 AC019171.1-201ENST00000601251 1056 ntBASIC24.51■■□□□ 1.51
PGBD3Q8N328 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PGBD3Q8N328 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.51■■□□□ 1.51
PGBD3Q8N328 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
PGBD3Q8N328 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PGBD3Q8N328 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
PGBD3Q8N328 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PGBD3Q8N328 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PGBD3Q8N328 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.51■■□□□ 1.51
PGBD3Q8N328 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PGBD3Q8N328 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.5■■□□□ 1.51
PGBD3Q8N328 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
PGBD3Q8N328 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PGBD3Q8N328 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
PGBD3Q8N328 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
PGBD3Q8N328 AC239859.2-201ENST00000444165 318 ntBASIC24.49■■□□□ 1.51
PGBD3Q8N328 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.49■■□□□ 1.51
PGBD3Q8N328 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.49■■□□□ 1.51
PGBD3Q8N328 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC24.49■■□□□ 1.51
PGBD3Q8N328 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PGBD3Q8N328 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
PGBD3Q8N328 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PGBD3Q8N328 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PGBD3Q8N328 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PGBD3Q8N328 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
PGBD3Q8N328 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PGBD3Q8N328 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
PGBD3Q8N328 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
PGBD3Q8N328 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
PGBD3Q8N328 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.46■■□□□ 1.51
PGBD3Q8N328 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.46■■□□□ 1.51
PGBD3Q8N328 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PGBD3Q8N328 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC24.45■■□□□ 1.51
PGBD3Q8N328 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PGBD3Q8N328 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
PGBD3Q8N328 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.45■■□□□ 1.5
PGBD3Q8N328 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PGBD3Q8N328 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PGBD3Q8N328 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PGBD3Q8N328 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
PGBD3Q8N328 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms