Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
PROM2Q8N271 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
PROM2Q8N271 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.59■■■□□ 2.65
PROM2Q8N271 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PROM2Q8N271 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PROM2Q8N271 AC022616.5-201ENST00000518796 181 ntBASIC31.58■■■□□ 2.65
PROM2Q8N271 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
PROM2Q8N271 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
PROM2Q8N271 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PROM2Q8N271 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC31.57■■■□□ 2.64
PROM2Q8N271 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
PROM2Q8N271 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PROM2Q8N271 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC31.56■■■□□ 2.64
PROM2Q8N271 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC31.56■■■□□ 2.64
PROM2Q8N271 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
PROM2Q8N271 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
PROM2Q8N271 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
PROM2Q8N271 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
PROM2Q8N271 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC31.55■■■□□ 2.64
PROM2Q8N271 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC31.55■■■□□ 2.64
PROM2Q8N271 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC31.55■■■□□ 2.64
PROM2Q8N271 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC31.55■■■□□ 2.64
PROM2Q8N271 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
PROM2Q8N271 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.54■■■□□ 2.64
PROM2Q8N271 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
PROM2Q8N271 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
PROM2Q8N271 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC31.54■■■□□ 2.64
PROM2Q8N271 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC31.54■■■□□ 2.64
PROM2Q8N271 AC096631.2-201ENST00000436136 790 ntBASIC31.54■■■□□ 2.64
PROM2Q8N271 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC31.54■■■□□ 2.64
PROM2Q8N271 AC092028.1-203ENST00000608262 953 ntBASIC31.54■■■□□ 2.64
PROM2Q8N271 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.54■■■□□ 2.64
PROM2Q8N271 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
PROM2Q8N271 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
PROM2Q8N271 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
PROM2Q8N271 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.53■■■□□ 2.64
PROM2Q8N271 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC31.53■■■□□ 2.64
PROM2Q8N271 AP002414.2-202ENST00000590929 1450 ntBASIC31.52■■■□□ 2.64
PROM2Q8N271 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.52■■■□□ 2.64
PROM2Q8N271 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.51■■■□□ 2.64
PROM2Q8N271 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
PROM2Q8N271 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC31.51■■■□□ 2.63
PROM2Q8N271 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC31.51■■■□□ 2.63
PROM2Q8N271 AL117332.1-201ENST00000622628 974 ntBASIC31.51■■■□□ 2.63
PROM2Q8N271 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
PROM2Q8N271 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
PROM2Q8N271 ZNRF2P3-201ENST00000424200 374 ntBASIC31.5■■■□□ 2.63
PROM2Q8N271 RARRES2P6-201ENST00000567333 442 ntBASIC31.5■■■□□ 2.63
PROM2Q8N271 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PROM2Q8N271 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
PROM2Q8N271 AC133561.4-201ENST00000566112 224 ntBASIC31.49■■■□□ 2.63
PROM2Q8N271 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.49■■■□□ 2.63
PROM2Q8N271 WHAMMP3-201ENST00000611636 1609 ntBASIC31.49■■■□□ 2.63
PROM2Q8N271 MIR3621-201ENST00000580529 85 ntBASIC31.48■■■□□ 2.63
PROM2Q8N271 MIR4466-201ENST00000606121 54 ntBASIC31.48■■■□□ 2.63
PROM2Q8N271 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC31.48■■■□□ 2.63
PROM2Q8N271 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
PROM2Q8N271 AC026271.2-201ENST00000428091 497 ntBASIC31.47■■■□□ 2.63
PROM2Q8N271 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC31.47■■■□□ 2.63
PROM2Q8N271 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC31.47■■■□□ 2.63
PROM2Q8N271 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC31.47■■■□□ 2.63
PROM2Q8N271 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
PROM2Q8N271 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
PROM2Q8N271 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.46■■■□□ 2.63
PROM2Q8N271 ABCB10P3-201ENST00000561950 2166 ntBASIC31.46■■■□□ 2.63
PROM2Q8N271 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PROM2Q8N271 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
PROM2Q8N271 GUK1-205ENST00000366722 850 ntTSL 3 BASIC31.45■■■□□ 2.63
PROM2Q8N271 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC31.45■■■□□ 2.63
PROM2Q8N271 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
PROM2Q8N271 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
PROM2Q8N271 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.44■■■□□ 2.62
PROM2Q8N271 EBPL-204ENST00000378272 766 ntTSL 3 BASIC31.44■■■□□ 2.62
PROM2Q8N271 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
PROM2Q8N271 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC31.44■■■□□ 2.62
PROM2Q8N271 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC31.44■■■□□ 2.62
PROM2Q8N271 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC31.44■■■□□ 2.62
PROM2Q8N271 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
PROM2Q8N271 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC31.43■■■□□ 2.62
PROM2Q8N271 AC120024.1-201ENST00000562672 995 ntBASIC31.43■■■□□ 2.62
PROM2Q8N271 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PROM2Q8N271 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
PROM2Q8N271 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC31.41■■■□□ 2.62
PROM2Q8N271 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
PROM2Q8N271 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC31.41■■■□□ 2.62
PROM2Q8N271 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
PROM2Q8N271 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PROM2Q8N271 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PROM2Q8N271 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.41■■■□□ 2.62
PROM2Q8N271 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PROM2Q8N271 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
PROM2Q8N271 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PROM2Q8N271 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PROM2Q8N271 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC31.4■■■□□ 2.62
PROM2Q8N271 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PROM2Q8N271 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC31.4■■■□□ 2.62
PROM2Q8N271 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
PROM2Q8N271 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
PROM2Q8N271 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PROM2Q8N271 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms