Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
COL27A1Q8IZC6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.3■■□□□ 1.32
COL27A1Q8IZC6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.3■■□□□ 1.32
COL27A1Q8IZC6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
COL27A1Q8IZC6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL27A1Q8IZC6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL27A1Q8IZC6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL27A1Q8IZC6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL27A1Q8IZC6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.28■■□□□ 1.32
COL27A1Q8IZC6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.28■■□□□ 1.32
COL27A1Q8IZC6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL27A1Q8IZC6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL27A1Q8IZC6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
COL27A1Q8IZC6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
COL27A1Q8IZC6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
COL27A1Q8IZC6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.26■■□□□ 1.31
COL27A1Q8IZC6 AC239859.2-201ENST00000444165 318 ntBASIC23.26■■□□□ 1.31
COL27A1Q8IZC6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.26■■□□□ 1.31
COL27A1Q8IZC6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.26■■□□□ 1.31
COL27A1Q8IZC6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
COL27A1Q8IZC6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.26■■□□□ 1.31
COL27A1Q8IZC6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
COL27A1Q8IZC6 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.26■■□□□ 1.31
COL27A1Q8IZC6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
COL27A1Q8IZC6 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
COL27A1Q8IZC6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
COL27A1Q8IZC6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
COL27A1Q8IZC6 LONRF2P2-201ENST00000439212 571 ntBASIC23.25■■□□□ 1.31
COL27A1Q8IZC6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.25■■□□□ 1.31
COL27A1Q8IZC6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
COL27A1Q8IZC6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
COL27A1Q8IZC6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.24■■□□□ 1.31
COL27A1Q8IZC6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
COL27A1Q8IZC6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL27A1Q8IZC6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
COL27A1Q8IZC6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.24■■□□□ 1.31
COL27A1Q8IZC6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL27A1Q8IZC6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL27A1Q8IZC6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL27A1Q8IZC6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL27A1Q8IZC6 UNC93B8-201ENST00000511903 705 ntBASIC23.22■■□□□ 1.31
COL27A1Q8IZC6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.22■■□□□ 1.31
COL27A1Q8IZC6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
COL27A1Q8IZC6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL27A1Q8IZC6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL27A1Q8IZC6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.22■■□□□ 1.31
COL27A1Q8IZC6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL27A1Q8IZC6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.22■■□□□ 1.31
COL27A1Q8IZC6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
COL27A1Q8IZC6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL27A1Q8IZC6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
COL27A1Q8IZC6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.21■■□□□ 1.31
COL27A1Q8IZC6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.21■■□□□ 1.31
COL27A1Q8IZC6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.21■■□□□ 1.31
COL27A1Q8IZC6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
COL27A1Q8IZC6 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL27A1Q8IZC6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL27A1Q8IZC6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
COL27A1Q8IZC6 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.2■■□□□ 1.3
COL27A1Q8IZC6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL27A1Q8IZC6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL27A1Q8IZC6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL27A1Q8IZC6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL27A1Q8IZC6 AC022616.5-201ENST00000518796 181 ntBASIC23.19■■□□□ 1.3
COL27A1Q8IZC6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COL27A1Q8IZC6 LINC01003-201ENST00000564834 1764 ntBASIC23.19■■□□□ 1.3
COL27A1Q8IZC6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.19■■□□□ 1.3
COL27A1Q8IZC6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.19■■□□□ 1.3
COL27A1Q8IZC6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COL27A1Q8IZC6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COL27A1Q8IZC6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
COL27A1Q8IZC6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.19■■□□□ 1.3
COL27A1Q8IZC6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL27A1Q8IZC6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL27A1Q8IZC6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL27A1Q8IZC6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL27A1Q8IZC6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.18■■□□□ 1.3
COL27A1Q8IZC6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL27A1Q8IZC6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL27A1Q8IZC6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
COL27A1Q8IZC6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL27A1Q8IZC6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
COL27A1Q8IZC6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
COL27A1Q8IZC6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL27A1Q8IZC6 BX664725.1-201ENST00000438252 379 ntBASIC23.17■■□□□ 1.3
COL27A1Q8IZC6 MIR4787-201ENST00000607364 84 ntBASIC23.17■■□□□ 1.3
COL27A1Q8IZC6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.17■■□□□ 1.3
COL27A1Q8IZC6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
COL27A1Q8IZC6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.16■■□□□ 1.3
COL27A1Q8IZC6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL27A1Q8IZC6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL27A1Q8IZC6 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
COL27A1Q8IZC6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL27A1Q8IZC6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.15■■□□□ 1.3
COL27A1Q8IZC6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL27A1Q8IZC6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL27A1Q8IZC6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL27A1Q8IZC6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.15■■□□□ 1.3
COL27A1Q8IZC6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL27A1Q8IZC6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms