Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 AC025884.2-201ENST00000553429 711 ntBASIC27.17■■□□□ 1.94
PPP4R3CPQ6ZMV5 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PPP4R3CPQ6ZMV5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
PPP4R3CPQ6ZMV5 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
PPP4R3CPQ6ZMV5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
PPP4R3CPQ6ZMV5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
PPP4R3CPQ6ZMV5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PPP4R3CPQ6ZMV5 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
PPP4R3CPQ6ZMV5 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.16■■□□□ 1.94
PPP4R3CPQ6ZMV5 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC27.15■■□□□ 1.94
PPP4R3CPQ6ZMV5 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC27.15■■□□□ 1.94
PPP4R3CPQ6ZMV5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
PPP4R3CPQ6ZMV5 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PPP4R3CPQ6ZMV5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PPP4R3CPQ6ZMV5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.15■■□□□ 1.94
PPP4R3CPQ6ZMV5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.15■■□□□ 1.94
PPP4R3CPQ6ZMV5 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
PPP4R3CPQ6ZMV5 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PPP4R3CPQ6ZMV5 AC007029.1-201ENST00000604183 313 ntBASIC27.14■■□□□ 1.94
PPP4R3CPQ6ZMV5 AL034417.3-201ENST00000641100 1043 ntBASIC27.14■■□□□ 1.94
PPP4R3CPQ6ZMV5 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PPP4R3CPQ6ZMV5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC27.14■■□□□ 1.94
PPP4R3CPQ6ZMV5 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.13■■□□□ 1.93
PPP4R3CPQ6ZMV5 SMPD5-203ENST00000639008 1464 ntBASIC27.13■■□□□ 1.93
PPP4R3CPQ6ZMV5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.13■■□□□ 1.93
PPP4R3CPQ6ZMV5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27.13■■□□□ 1.93
PPP4R3CPQ6ZMV5 NTF6A-201ENST00000591175 560 ntBASIC27.13■■□□□ 1.93
PPP4R3CPQ6ZMV5 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC27.13■■□□□ 1.93
PPP4R3CPQ6ZMV5 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PPP4R3CPQ6ZMV5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.13■■□□□ 1.93
PPP4R3CPQ6ZMV5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
PPP4R3CPQ6ZMV5 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC27.12■■□□□ 1.93
PPP4R3CPQ6ZMV5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC27.12■■□□□ 1.93
PPP4R3CPQ6ZMV5 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
PPP4R3CPQ6ZMV5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PPP4R3CPQ6ZMV5 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.11■■□□□ 1.93
PPP4R3CPQ6ZMV5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.11■■□□□ 1.93
PPP4R3CPQ6ZMV5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PPP4R3CPQ6ZMV5 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PPP4R3CPQ6ZMV5 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.09■■□□□ 1.93
PPP4R3CPQ6ZMV5 U85056.1-201ENST00000616429 682 ntBASIC27.09■■□□□ 1.93
PPP4R3CPQ6ZMV5 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
PPP4R3CPQ6ZMV5 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
PPP4R3CPQ6ZMV5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.08■■□□□ 1.93
PPP4R3CPQ6ZMV5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC27.07■■□□□ 1.92
PPP4R3CPQ6ZMV5 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
PPP4R3CPQ6ZMV5 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
PPP4R3CPQ6ZMV5 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
PPP4R3CPQ6ZMV5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.07■■□□□ 1.92
PPP4R3CPQ6ZMV5 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PPP4R3CPQ6ZMV5 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
PPP4R3CPQ6ZMV5 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
PPP4R3CPQ6ZMV5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PPP4R3CPQ6ZMV5 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PPP4R3CPQ6ZMV5 SULT1A1-211ENST00000569554 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PPP4R3CPQ6ZMV5 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PPP4R3CPQ6ZMV5 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PPP4R3CPQ6ZMV5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC27.05■■□□□ 1.92
PPP4R3CPQ6ZMV5 HNRNPA1P23-201ENST00000491091 1133 ntBASIC27.05■■□□□ 1.92
PPP4R3CPQ6ZMV5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PPP4R3CPQ6ZMV5 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC27.05■■□□□ 1.92
PPP4R3CPQ6ZMV5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
PPP4R3CPQ6ZMV5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
PPP4R3CPQ6ZMV5 AC108359.1-201ENST00000616451 1211 ntBASIC27.04■■□□□ 1.92
PPP4R3CPQ6ZMV5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
PPP4R3CPQ6ZMV5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.04■■□□□ 1.92
PPP4R3CPQ6ZMV5 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
PPP4R3CPQ6ZMV5 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PPP4R3CPQ6ZMV5 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
PPP4R3CPQ6ZMV5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC27.03■■□□□ 1.92
PPP4R3CPQ6ZMV5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PPP4R3CPQ6ZMV5 GFER-205ENST00000569451 517 ntTSL 5 BASIC27.03■■□□□ 1.92
PPP4R3CPQ6ZMV5 AL359504.2-201ENST00000605506 1601 ntBASIC27.03■■□□□ 1.92
PPP4R3CPQ6ZMV5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.02■■□□□ 1.92
PPP4R3CPQ6ZMV5 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC27.02■■□□□ 1.92
PPP4R3CPQ6ZMV5 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
PPP4R3CPQ6ZMV5 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.02■■□□□ 1.92
PPP4R3CPQ6ZMV5 AC091060.1-201ENST00000623524 1766 ntBASIC27.02■■□□□ 1.92
PPP4R3CPQ6ZMV5 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC27.02■■□□□ 1.92
PPP4R3CPQ6ZMV5 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC27.02■■□□□ 1.92
PPP4R3CPQ6ZMV5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC27.02■■□□□ 1.92
PPP4R3CPQ6ZMV5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
PPP4R3CPQ6ZMV5 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.92
PPP4R3CPQ6ZMV5 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
PPP4R3CPQ6ZMV5 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.01■■□□□ 1.91
PPP4R3CPQ6ZMV5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC27■■□□□ 1.91
PPP4R3CPQ6ZMV5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC27■■□□□ 1.91
PPP4R3CPQ6ZMV5 RP9P-202ENST00000450133 1212 ntBASIC27■■□□□ 1.91
PPP4R3CPQ6ZMV5 MIR3960-201ENST00000583311 91 ntBASIC27■■□□□ 1.91
PPP4R3CPQ6ZMV5 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
PPP4R3CPQ6ZMV5 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PPP4R3CPQ6ZMV5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PPP4R3CPQ6ZMV5 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.99■■□□□ 1.91
PPP4R3CPQ6ZMV5 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PPP4R3CPQ6ZMV5 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PPP4R3CPQ6ZMV5 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
PPP4R3CPQ6ZMV5 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
PPP4R3CPQ6ZMV5 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PPP4R3CPQ6ZMV5 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
PPP4R3CPQ6ZMV5 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms