Protein–RNA interactions for Protein: Q6PJ69

TRIM65, Tripartite motif-containing protein 65, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65Q6PJ69 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TRIM65Q6PJ69 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
TRIM65Q6PJ69 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.52■■□□□ 1.84
TRIM65Q6PJ69 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.52■■□□□ 1.84
TRIM65Q6PJ69 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
TRIM65Q6PJ69 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM65Q6PJ69 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM65Q6PJ69 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TRIM65Q6PJ69 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRIM65Q6PJ69 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRIM65Q6PJ69 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.5■■□□□ 1.83
TRIM65Q6PJ69 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TRIM65Q6PJ69 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
TRIM65Q6PJ69 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
TRIM65Q6PJ69 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM65Q6PJ69 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.49■■□□□ 1.83
TRIM65Q6PJ69 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM65Q6PJ69 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.49■■□□□ 1.83
TRIM65Q6PJ69 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.49■■□□□ 1.83
TRIM65Q6PJ69 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
TRIM65Q6PJ69 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM65Q6PJ69 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TRIM65Q6PJ69 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM65Q6PJ69 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM65Q6PJ69 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM65Q6PJ69 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.48■■□□□ 1.83
TRIM65Q6PJ69 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM65Q6PJ69 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TRIM65Q6PJ69 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
TRIM65Q6PJ69 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM65Q6PJ69 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.47■■□□□ 1.83
TRIM65Q6PJ69 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.47■■□□□ 1.83
TRIM65Q6PJ69 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM65Q6PJ69 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM65Q6PJ69 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM65Q6PJ69 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TRIM65Q6PJ69 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
TRIM65Q6PJ69 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
TRIM65Q6PJ69 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
TRIM65Q6PJ69 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
TRIM65Q6PJ69 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.45■■□□□ 1.82
TRIM65Q6PJ69 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.45■■□□□ 1.82
TRIM65Q6PJ69 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC26.45■■□□□ 1.82
TRIM65Q6PJ69 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
TRIM65Q6PJ69 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
TRIM65Q6PJ69 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM65Q6PJ69 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.44■■□□□ 1.82
TRIM65Q6PJ69 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM65Q6PJ69 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
TRIM65Q6PJ69 AL359504.2-201ENST00000605506 1601 ntBASIC26.43■■□□□ 1.82
TRIM65Q6PJ69 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM65Q6PJ69 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRIM65Q6PJ69 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
TRIM65Q6PJ69 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM65Q6PJ69 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC26.42■■□□□ 1.82
TRIM65Q6PJ69 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM65Q6PJ69 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
TRIM65Q6PJ69 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM65Q6PJ69 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.42■■□□□ 1.82
TRIM65Q6PJ69 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.42■■□□□ 1.82
TRIM65Q6PJ69 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.42■■□□□ 1.82
TRIM65Q6PJ69 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM65Q6PJ69 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TRIM65Q6PJ69 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.42■■□□□ 1.82
TRIM65Q6PJ69 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
TRIM65Q6PJ69 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM65Q6PJ69 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM65Q6PJ69 MIR639-201ENST00000384974 98 ntBASIC26.41■■□□□ 1.82
TRIM65Q6PJ69 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.41■■□□□ 1.82
TRIM65Q6PJ69 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.41■■□□□ 1.82
TRIM65Q6PJ69 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TRIM65Q6PJ69 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.41■■□□□ 1.82
TRIM65Q6PJ69 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.41■■□□□ 1.82
TRIM65Q6PJ69 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.4■■□□□ 1.82
TRIM65Q6PJ69 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
TRIM65Q6PJ69 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
TRIM65Q6PJ69 AC126177.7-201ENST00000547904 679 ntBASIC26.4■■□□□ 1.82
TRIM65Q6PJ69 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
TRIM65Q6PJ69 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC26.39■■□□□ 1.82
TRIM65Q6PJ69 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM65Q6PJ69 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM65Q6PJ69 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
TRIM65Q6PJ69 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TRIM65Q6PJ69 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TRIM65Q6PJ69 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM65Q6PJ69 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM65Q6PJ69 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TRIM65Q6PJ69 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
TRIM65Q6PJ69 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM65Q6PJ69 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.37■■□□□ 1.81
TRIM65Q6PJ69 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.37■■□□□ 1.81
TRIM65Q6PJ69 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM65Q6PJ69 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM65Q6PJ69 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM65Q6PJ69 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.36■■□□□ 1.81
TRIM65Q6PJ69 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM65Q6PJ69 AC142381.3-201ENST00000568208 1670 ntBASIC26.36■■□□□ 1.81
TRIM65Q6PJ69 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.36■■□□□ 1.81
TRIM65Q6PJ69 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
TRIM65Q6PJ69 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms